RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 LARSQ9P2J5 1176 aaKnown RBP22.52■■□□□ 1.2
VTI1B-205ENST00000555543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.51■■□□□ 1.19
VTI1B-205ENST00000555543 CXCL14O95715 111 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 CA8P35219 290 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 DDIT3P35638 169 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 PAAF1Q9BRP4 392 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 STK17AQ9UEE5 414 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 CCDC39Q9UFE4 941 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 CD207Q9UJ71 328 aa22.51■■□□□ 1.19
VTI1B-205ENST00000555543 TNFRSF10AO00220 468 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 SPTLC2O15270 562 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 MBTPS2O43462 519 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 FAM13AO94988 1023 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 EFEMP2O95967 443 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 KRT18P05783 430 aaKnown RBP22.5■■□□□ 1.19
VTI1B-205ENST00000555543 TXLNAP40222 546 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 STRN3Q13033 797 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 PTPN14Q15678 1187 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 NAB2Q15742 525 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 PUS10Q3MIT2 529 aaKnown RBP22.5■■□□□ 1.19
VTI1B-205ENST00000555543 RRAGBQ5VZM2 374 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 LLGL2Q6P1M3 1020 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 ZBTB33Q86T24 672 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 RNF168Q8IYW5 571 aaPredicted RBP22.5■■□□□ 1.19
VTI1B-205ENST00000555543 ZBTB45Q96K62 511 aaPredicted RBP22.5■■□□□ 1.19
VTI1B-205ENST00000555543 FIZ1Q96SL8 496 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 PARVGQ9HBI0 331 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 IRAK3Q9Y616 596 aa22.5■■□□□ 1.19
VTI1B-205ENST00000555543 CLASP2O75122 1294 aaKnown RBP22.49■■□□□ 1.19
VTI1B-205ENST00000555543 YEATS4O95619 227 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 PDIA4P13667 645 aaKnown RBP22.49■■□□□ 1.19
VTI1B-205ENST00000555543 GRM5P41594 1212 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 SMAD4Q13485 552 aaKnown RBP22.49■■□□□ 1.19
VTI1B-205ENST00000555543 MPZL3Q6UWV2 235 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 TAS1R1Q7RTX1 841 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 HAUS6Q7Z4H7 955 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 MYCT1Q8N699 235 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 SMRP1Q8NCR6 262 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 PANK2Q9BZ23 570 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 KCNG1Q9UIX4 513 aa22.49■■□□□ 1.19
VTI1B-205ENST00000555543 FSD2A1L4K1 749 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 CASTOR2A6NHX0 329 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 K7ENM7 598 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 PPP6R2O75170 966 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 TBCAO75347 108 aaKnown RBP22.48■■□□□ 1.19
VTI1B-205ENST00000555543 BRD1O95696 1058 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 SOD2P04179 222 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 MCF2P10911 925 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 HARSP12081 509 aaKnown RBP22.48■■□□□ 1.19
VTI1B-205ENST00000555543 OSTNP61366 133 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 COASYQ13057 564 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 TUSC3Q13454 348 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 GLRA4Q5JXX5 417 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 DYMQ7RTS9 669 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 APBB1IPQ7Z5R6 666 aaPredicted RBP22.48■■□□□ 1.19
VTI1B-205ENST00000555543 FAM178BQ8IXR5 827 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 KCNN1Q92952 543 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 HERC2P3Q9BVR0 1158 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 ZHX3Q9H4I2 956 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 CD320Q9NPF0 282 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 ANKFY1Q9P2R3 1169 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 HCFC2Q9Y5Z7 792 aa22.48■■□□□ 1.19
VTI1B-205ENST00000555543 MYMKA6NI61 221 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 MEFVO15553 781 aaPredicted RBP22.47■■□□□ 1.19
VTI1B-205ENST00000555543 TOM1L1O75674 476 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 THP07101 528 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 BMS1Q14692 1282 aaKnown RBP22.47■■□□□ 1.19
VTI1B-205ENST00000555543 SMAD2Q15796 467 aaKnown RBP22.47■■□□□ 1.19
VTI1B-205ENST00000555543 TMEM184AQ6ZMB5 413 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 PDILTQ8N807 584 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 TCHPQ9BT92 498 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 COLEC11Q9BWP8 271 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 HAPLN2Q9GZV7 340 aa22.47■■□□□ 1.19
VTI1B-205ENST00000555543 DAXXQ9UER7 740 aaPredicted RBP22.47■■□□□ 1.19
VTI1B-205ENST00000555543 H0YCG3 227 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 TRAK2O60296 914 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 LILRB3O75022 631 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 NR1I2O75469 434 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 NMT1P30419 496 aaKnown RBP22.46■■□□□ 1.19
VTI1B-205ENST00000555543 STAT6P42226 847 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 HSP90AA2PQ14568 343 aaPredicted RBP22.46■■□□□ 1.19
VTI1B-205ENST00000555543 NOLC1Q14978 699 aaKnown RBP eCLIP22.46■■□□□ 1.19
VTI1B-205ENST00000555543 SEZ6Q53EL9 994 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 ANKRD54Q6NXT1 300 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 ZPBP2Q6X784 338 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 CCDC73Q6ZRK6 1079 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 DDX12PQ92771 950 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 DNAJC19Q96DA6 116 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 B3GALT6Q96L58 329 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 PPP1R10Q96QC0 940 aaKnown RBP22.46■■□□□ 1.19
VTI1B-205ENST00000555543 CCDC94Q9BW85 323 aaPredicted RBP22.46■■□□□ 1.19
VTI1B-205ENST00000555543 GPR62Q9BZJ7 368 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 STK39Q9UEW8 545 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 ADAM28Q9UKQ2 775 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 TBX20Q9UMR3 447 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 ZDHHC9Q9Y397 364 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 TRIP11Q15643 1979 aa22.46■■□□□ 1.19
VTI1B-205ENST00000555543 C2CD2LO14523 706 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 KIF4AO95239 1232 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 DNM1Q05193 864 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms