RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 BPIP17213 487 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 DHCR24Q15392 516 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 PITRM1Q5JRX3 1037 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 PDZD4Q76G19 769 aaPredicted RBP7.05□□□□□ -1.28
VRK1-203ENST00000555067 ADGRG3Q86Y34 549 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 LILRA3Q8N6C8 439 aaPredicted RBP7.05□□□□□ -1.28
VRK1-203ENST00000555067 TOR3AQ9H497 397 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 SPC25Q9HBM1 224 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 SPON1Q9HCB6 807 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 CHPF2Q9P2E5 772 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 CHST2Q9Y4C5 530 aa7.05□□□□□ -1.28
VRK1-203ENST00000555067 CENPVL1A0A0U1RR11 272 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 TMEM200CA6NKL6 621 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 TPD52L2O43399 206 aaKnown RBP7.04□□□□□ -1.28
VRK1-203ENST00000555067 ULK1O75385 1050 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 ITGA10O75578 1167 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 MAP4K4O95819 1239 aaPredicted RBP7.04□□□□□ -1.28
VRK1-203ENST00000555067 PLEKHG6Q3KR16 790 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 ZNF480Q8WV37 535 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 PSMD1Q99460 953 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 CYP4F11Q9HBI6 524 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 GPRC5DQ9NZD1 345 aa7.04□□□□□ -1.28
VRK1-203ENST00000555067 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.03□□□□□ -1.28
VRK1-203ENST00000555067 LEFTY2O00292 366 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 SPATA31D3P0C874 917 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 MYCLP1P12525 358 aaPredicted RBP7.03□□□□□ -1.28
VRK1-203ENST00000555067 ZNF37AP17032 561 aaPredicted RBP7.03□□□□□ -1.28
VRK1-203ENST00000555067 ZSCAN20P17040 1043 aaPredicted RBP7.03□□□□□ -1.28
VRK1-203ENST00000555067 CTSSP25774 331 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 CRHR1P34998 444 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 LGALS4P56470 323 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 FAM189BP81408 668 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 NHLH2Q02577 135 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 HECTD2Q5U5R9 776 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 ABHD15Q6UXT9 468 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 SPATA31D4Q6ZUB0 917 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 ARHGEF19Q8IW93 802 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 OR10H5Q8NGA6 315 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 ACAP3Q96P50 834 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 PRDM12Q9H4Q4 367 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
VRK1-203ENST00000555067 TBKBP1A7MCY6 615 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 ZEB2O60315 1214 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 PHF2O75151 1096 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 NCR1O76036 304 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 LPLP06858 475 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 RBP3P10745 1247 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 SESN3P58005 492 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 FSCN1Q16658 493 aaKnown RBP7.02□□□□□ -1.29
VRK1-203ENST00000555067 UGT8Q16880 541 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 CT83Q5H943 113 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 GJC2Q5T442 439 aaPredicted RBP7.02□□□□□ -1.29
VRK1-203ENST00000555067 EFCAB12Q6NXP0 572 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 OLFML1Q6UWY5 402 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 STAG1Q8WVM7 1258 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 TFAP2CQ92754 450 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 MYH16Q9H6N6 1097 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 IFT22Q9H7X7 185 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 DDX56Q9NY93 547 aaKnown RBP7.02□□□□□ -1.29
VRK1-203ENST00000555067 ZMYM3Q14202 1370 aa7.02□□□□□ -1.29
VRK1-203ENST00000555067 POLR2AP24928 1970 aaKnown RBP7.01□□□□□ -1.29
VRK1-203ENST00000555067 LPXNO60711 386 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 CD38P28907 300 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 BMPR1AP36894 532 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 FLT3LGP49771 235 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 USP14P54578 494 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 RNASE9P60153 205 aaKnown RBP7.01□□□□□ -1.29
VRK1-203ENST00000555067 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 BTNL9Q6UXG8 535 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 Q6YL49 198 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 ZFP28Q8NHY6 868 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 MDM1Q8TC05 714 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 RAX2Q96IS3 184 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 TTC1Q99614 292 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 SERHL2Q9H4I8 314 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 G3BP2Q9UN86 482 aaKnown RBP7.01□□□□□ -1.29
VRK1-203ENST00000555067 APOBEC2Q9Y235 224 aaKnown RBP7.01□□□□□ -1.29
VRK1-203ENST00000555067 RPTORQ8N122 1335 aa7.01□□□□□ -1.29
VRK1-203ENST00000555067 HLA-DOAP06340 250 aa7□□□□□ -1.29
VRK1-203ENST00000555067 ENPP1P22413 925 aa7□□□□□ -1.29
VRK1-203ENST00000555067 ZEB1P37275 1124 aaPredicted RBP7□□□□□ -1.29
VRK1-203ENST00000555067 AVPR1BP47901 424 aa7□□□□□ -1.29
VRK1-203ENST00000555067 AMPD3Q01432 767 aa7□□□□□ -1.29
VRK1-203ENST00000555067 PDCD1Q15116 288 aa7□□□□□ -1.29
VRK1-203ENST00000555067 CPEB4Q17RY0 729 aaKnown RBP eCLIP7□□□□□ -1.29
VRK1-203ENST00000555067 BMT2Q1RMZ1 405 aa7□□□□□ -1.29
VRK1-203ENST00000555067 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
VRK1-203ENST00000555067 ANKS6Q68DC2 871 aa7□□□□□ -1.29
VRK1-203ENST00000555067 TMED8Q6PL24 325 aaPredicted RBP7□□□□□ -1.29
VRK1-203ENST00000555067 HDGFL2Q7Z4V5 671 aaPredicted RBP7□□□□□ -1.29
VRK1-203ENST00000555067 SYT12Q8IV01 421 aa7□□□□□ -1.29
VRK1-203ENST00000555067 BEND2Q8NDZ0 799 aa7□□□□□ -1.29
VRK1-203ENST00000555067 SUPT20HQ8NEM7 779 aa7□□□□□ -1.29
VRK1-203ENST00000555067 TOPORSQ9NS56 1045 aaPredicted RBP7□□□□□ -1.29
VRK1-203ENST00000555067 POGKQ9P215 609 aa7□□□□□ -1.29
VRK1-203ENST00000555067 COX11Q9Y6N1 276 aa7□□□□□ -1.29
VRK1-203ENST00000555067 PJA2O43164 708 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 CLK3P49761 638 aaKnown RBP6.99□□□□□ -1.29
VRK1-203ENST00000555067 MST1LQ2TV78 715 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms