RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
XRCC3-208ENST00000554811 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
XRCC3-208ENST00000554811 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
XRCC3-208ENST00000554811 CDC42EP4Q9H3Q1 356 aaKnown RBP12.69□□□□□ -0.38
XRCC3-208ENST00000554811 MYH11P35749 1972 aa12.69□□□□□ -0.38
XRCC3-208ENST00000554811 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 KIAA0391O15091 583 aaKnown RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 CD19P15391 556 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 CHRNA3P32297 505 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 COILP38432 576 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 CDR2LQ86X02 465 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 C4orf33Q8N1A6 199 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 MREGQ8N565 214 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 VCPKMTQ9H867 229 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 SCN7AQ01118 1682 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 ATP9AO75110 1047 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 RTN2O75298 545 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 GH1P01241 217 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 CNGA1P29973 690 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 HOXA10P31260 410 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 CHKAP35790 457 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 ITGA8P53708 1063 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 TRIM68Q6AZZ1 485 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 C15orf52Q6ZUT6 534 aaKnown RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 TMEM143Q96AN5 459 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 KLHL29Q96CT2 875 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 KLF6Q99612 283 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 TMEM206Q9H813 350 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 SPATS2Q86XZ4 545 aaKnown RBP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
XRCC3-208ENST00000554811 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
XRCC3-208ENST00000554811 H0Y3Z8 333 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 O00370 1275 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 EIF3DO15371 548 aaKnown RBP eCLIP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 RALAP11233 206 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 CYP11B1P15538 503 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 YY1P25490 414 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 SESN3P58005 492 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 BYSLQ13895 437 aaKnown RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 ANKRD20A8PQ5CZ79 823 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 C6orf118Q5T5N4 469 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 DAW1Q8N136 415 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 EPS8L1Q8TE68 723 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 PRCCQ92733 491 aaPredicted RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 COL20A1Q9P218 1284 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 PIK3R2O00459 728 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 KRT19P08727 400 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 RARRES1P49788 294 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 RPS6P62753 249 aaKnown RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 ATP13A4Q4VNC1 1196 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 KRT39Q6A163 491 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 ANKMY2Q8IV38 441 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 STMN4Q9H169 189 aaPredicted RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 SLC12A6Q9UHW9 1150 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 TMEM59LQ9UK28 342 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 MIF4GDA9UHW6 222 aaKnown RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 H0YGN5 161 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 ZSCAN5DPP0CG00 497 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 AGBL2Q5U5Z8 902 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 DUPD1Q68J44 220 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 KREMEN1Q96MU8 473 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
XRCC3-208ENST00000554811 AGTPBP1Q9UPW5 1226 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 NFS1Q9Y697 457 aa12.67□□□□□ -0.38
XRCC3-208ENST00000554811 CHUKO15111 745 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 UBOX5O94941 541 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 MARK3P27448 753 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 ORC1Q13415 861 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 DHX34Q14147 1143 aaKnown RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 FBXL13Q8NEE6 735 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 DDX60LQ5H9U9 1706 aaKnown RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 FAM187AA6NFU0 413 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 RASA4BC9J798 803 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 RASA4O43374 803 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 PEX10O60683 326 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 SPP2Q13103 211 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 CD302Q8IX05 232 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 TGS1Q96RS0 853 aaKnown RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 FAM129AQ9BZQ8 928 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 RAB20Q9NX57 234 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms