RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 FAM118BQ9BPY3 351 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 TXLNGYQ9BZA5 131 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 TMEM117Q9H0C3 514 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 FGFR1OP2Q9NVK5 253 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 USTQ9Y2C2 406 aa10.19□□□□□ -0.78
SYNE2-213ENST00000554805 FOXO6A8MYZ6 492 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 P4HBP07237 508 aaKnown RBP10.18□□□□□ -0.78
SYNE2-213ENST00000554805 AUHQ13825 339 aaKnown RBP10.18□□□□□ -0.78
SYNE2-213ENST00000554805 AOC3Q16853 763 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 C2CD6Q53TS8 623 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 SPDYCQ5MJ68 293 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 BTNL9Q6UXG8 535 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 TRPM8Q7Z2W7 1104 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 ZDHHC14Q8IZN3 488 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 EPS8L1Q8TE68 723 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 BICD1Q96G01 975 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 MASTLQ96GX5 879 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 KIFC3Q9BVG8 833 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 MTFR1LQ9H019 292 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 CDC42EP4Q9H3Q1 356 aaKnown RBP10.18□□□□□ -0.78
SYNE2-213ENST00000554805 KCND2Q9NZV8 630 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 PCYOX1Q9UHG3 505 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 ALAS1P13196 640 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 SP4Q02446 784 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 KYNUQ16719 465 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 DACT2Q5SW24 774 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 GSTA5Q7RTV2 222 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 LMO3Q8TAP4 145 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 N4BP2L2Q92802 583 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-213ENST00000554805 AGBL1Q96MI9 1066 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 MXRA8Q9BRK3 442 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 TOPORSQ9NS56 1045 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-213ENST00000554805 STK32BQ9NY57 414 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 STK38LQ9Y2H1 464 aa10.18□□□□□ -0.78
SYNE2-213ENST00000554805 TMEM120BA0PK00 339 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 GAS8O95995 478 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ATF2P15336 505 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CTNNA2P26232 953 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 STX2P32856 288 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ZNF365Q70YC5 407 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 SLC9A9Q8IVB4 645 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ATXN2LQ8WWM7 1075 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 MRRFQ96E11 262 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 FAM84AQ96KN4 292 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ABCF3Q9NUQ8 709 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 GEMIN8Q9NWZ8 242 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CNOT7Q9UIV1 285 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ANAPC5Q9UJX4 755 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ZHX2Q9Y6X8 837 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 C21orf2O43822 256 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 PLS3P13797 630 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CHRNB2P17787 502 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 EIF2AK2P19525 551 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 PEX5P50542 639 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 KREMEN1Q96MU8 473 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ZNF317Q96PQ6 595 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 PI4K2AQ9BTU6 479 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 NKIRAS1Q9NYS0 192 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ASAP2O43150 1006 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 SUN1O94901 812 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 ADRB2P07550 413 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 VIL1P09327 827 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 GHRP10912 638 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CYP11B1P15538 503 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CREB1P16220 341 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 SLC8A1P32418 973 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 QARSP47897 775 aaKnown RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CNGA2Q16280 664 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 COL24A1Q17RW2 1714 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 LACTB2Q53H82 288 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-213ENST00000554805 PLA2G4FQ68DD2 849 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 KRT39Q6A163 491 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CYP4F22Q6NT55 531 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 PLEKHO2Q8TD55 490 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 MORC4Q8TE76 937 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 POMGNT1Q8WZA1 660 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 SEMA4DQ92854 862 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 CTNNAL1Q9UBT7 734 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 EXOC7Q9UPT5 735 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 PCDHA3Q9Y5H8 950 aa10.17□□□□□ -0.78
SYNE2-213ENST00000554805 NRAPQ86VF7 1730 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 P4HA2O15460 535 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 UBOX5O94941 541 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 GZMAP12544 262 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 BRAFP15056 766 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ITGB5P18084 799 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ATP5DP30049 168 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ELF3P78545 371 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 FMO1Q01740 532 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SNRNP35Q16560 246 aaKnown RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SLC27A3Q5K4L6 730 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 EXOC3L1Q86VI1 746 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 THOC1Q96FV9 657 aaKnown RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 PWWP2AQ96N64 755 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CCDC77Q9BR77 488 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ADAM7Q9H2U9 754 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms