RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TACR2P21452 398 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 MAN2A2P49641 1150 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ZXDAP98168 799 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 MGAT2Q10469 447 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 CRHR2Q13324 411 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 FAM214AQ32MH5 1076 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 DCAF17Q5H9S7 520 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 CCDC181Q5TID7 509 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 NAIF1Q69YI7 327 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 Q6ZVL8 140 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 GSPT2Q8IYD1 628 aaKnown RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 Q8N1X5 172 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 CACTINQ8WUQ7 758 aaKnown RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ST8SIA2Q92186 375 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 RBM12Q9NTZ6 932 aaKnown RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 GPRC5DQ9NZD1 345 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 CEP72Q9P209 647 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ADCY6O43306 1168 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 AKR1B10O60218 316 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 PHF2O75151 1096 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 GASTP01350 101 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 C1SP09871 688 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 PF4V1P10720 104 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 C6P13671 934 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 CRHR1P34998 444 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 WASP42768 502 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 XDHP47989 1333 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 PTH1RQ03431 593 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 SEPT2Q15019 361 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 METTL24Q5JXM2 366 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 TMEM240Q5SV17 173 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 GJC2Q5T442 439 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-213ENST00000554776 DOK3Q7L591 496 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 TRMT2AQ8IZ69 625 aaKnown RBP4.08□□□□□ -1.76
SCFD1-213ENST00000554776 MB21D1Q8N884 522 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 OR2I1PQ8NGU4 316 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 ATXN2LQ8WWM7 1075 aaKnown RBP4.08□□□□□ -1.76
SCFD1-213ENST00000554776 LRGUKQ96M69 825 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 ADI1Q9BV57 179 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 LSM14BQ9BX40 385 aaKnown RBP4.08□□□□□ -1.76
SCFD1-213ENST00000554776 GPR87Q9BY21 358 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 ZBTB21Q9ULJ3 1066 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 MRFAP1Q9Y605 127 aa4.08□□□□□ -1.76
SCFD1-213ENST00000554776 GOLGA6L6A8MZA4 724 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 WNT10BO00744 389 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 ECHS1P30084 290 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 ADSLP30566 484 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 SREBF1P36956 1147 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 SLC6A9P48067 706 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 TBX4P57082 545 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 DGCR2P98153 550 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 APBA1Q02410 837 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 CNGB1Q14028 1251 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 TOB2Q14106 344 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 MLC1Q15049 377 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 PRAMEF14Q5SWL7 426 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 GPRIN1Q7Z2K8 1008 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 FAM83AQ86UY5 434 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 CMTR2Q8IYT2 770 aaKnown RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 CPA6Q8N4T0 437 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 PPM1NQ8N819 430 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 OR7D4Q8NG98 312 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 OR52N2Q8NGI0 321 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 TTC8Q8TAM2 541 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 NRG4Q8WWG1 115 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 C8orf48Q96LL4 319 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 PLEKHG4BQ96PX9 1271 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 CDC5LQ99459 802 aaKnown RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 MNTQ99583 582 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 CPPED1Q9BRF8 314 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 CPEB1Q9BZB8 566 aaKnown RBP4.07□□□□□ -1.76
SCFD1-213ENST00000554776 BCO1Q9HAY6 547 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 PARPBPQ9NWS1 579 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 SERPINB13Q9UIV8 391 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 SIK3Q9Y2K2 1263 aa4.07□□□□□ -1.76
SCFD1-213ENST00000554776 ZMYM3Q14202 1370 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 E2F8A0AVK6 867 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 FAM171A2A8MVW0 826 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 GRXCR1A8MXD5 290 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 PRC1O43663 620 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 FZD7O75084 574 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 IL33O95760 270 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 PEX11BO96011 259 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 MYBP10242 640 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 GSPT1P15170 499 aaKnown RBP4.06□□□□□ -1.76
SCFD1-213ENST00000554776 HK1P19367 917 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 EDNRBP24530 442 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 GUCY1A2P33402 732 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 RECQLP46063 649 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-213ENST00000554776 NOMO1Q15155 1222 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 FAM102BQ5T8I3 360 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 EFCAB2Q5VUJ9 269 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 ZNF572Q7Z3I7 529 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-213ENST00000554776 CCDC146Q8IYE0 955 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.06□□□□□ -1.76
SCFD1-213ENST00000554776 REPS2Q8NFH8 660 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 MDM1Q8TC05 714 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 PGBD4Q96DM1 585 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms