RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CCDC94Q9BW85 323 aaPredicted RBP15.62■□□□□ 0.09
SHOX2-206ENST00000554685 HAPLN2Q9GZV7 340 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 HIPK3Q9H422 1215 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 ERVK-5Q9HDB9 667 aa15.62■□□□□ 0.09
SHOX2-206ENST00000554685 GOLGA6L6A8MZA4 724 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 IL18RAPO95256 599 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 NPTXRO95502 500 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 ADRB2P07550 413 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 SKIP12755 728 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 GTF2H1P32780 548 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 ACOT2P49753 483 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 UBXN1Q04323 297 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 FAAP100Q0VG06 881 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 CETN1Q12798 172 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 NR1I3Q14994 352 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 MIIPQ5JXC2 388 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 TWF2Q6IBS0 349 aaKnown RBP15.61■□□□□ 0.09
SHOX2-206ENST00000554685 CD302Q8IX05 232 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 THNSL1Q8IYQ7 743 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 SLC35C1Q96A29 364 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 NAP1L5Q96NT1 182 aaPredicted RBP15.61■□□□□ 0.09
SHOX2-206ENST00000554685 RPF1Q9H9Y2 349 aaKnown RBP15.61■□□□□ 0.09
SHOX2-206ENST00000554685 CPSF3Q9UKF6 684 aaKnown RBP15.61■□□□□ 0.09
SHOX2-206ENST00000554685 PADI3Q9ULW8 664 aa15.61■□□□□ 0.09
SHOX2-206ENST00000554685 CENPFP49454 3210 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 A0A1W2PQC6 194 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 GTPBP10A4D1E9 387 aaKnown RBP15.6■□□□□ 0.09
SHOX2-206ENST00000554685 P4HA2O15460 535 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 FAM189A1O60320 539 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 CLTBP09497 229 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 CD52P31358 61 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 RAB27AP51159 221 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 AP3M2P53677 418 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 YARSP54577 528 aaKnown RBP15.6■□□□□ 0.09
SHOX2-206ENST00000554685 CCDC173Q0VFZ6 552 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 KCNH2Q12809 1159 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 TRAF7Q6Q0C0 670 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 CRELD2Q6UXH1 353 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-206ENST00000554685 CDR2LQ86X02 465 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-206ENST00000554685 PARD3BQ8TEW8 1205 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 APBB2Q92870 758 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 ACAP3Q96P50 834 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 FTHL17Q9BXU8 183 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 AGO3Q9H9G7 860 aaKnown RBP15.6■□□□□ 0.09
SHOX2-206ENST00000554685 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-206ENST00000554685 TMEM39AQ9NV64 488 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
SHOX2-206ENST00000554685 PMM2O15305 246 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 STAG3L1P0CL83 205 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 RFC2P35250 354 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 LRRC26Q2I0M4 334 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 DRC7Q8IY82 874 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 ZSWIM2Q8NEG5 633 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 CCDC127Q96BQ5 260 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 IQCDQ96DY2 449 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 ERGIC2Q96RQ1 377 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 CGRRF1Q99675 332 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 TRAIPQ9BWF2 469 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 IFIH1Q9BYX4 1025 aaKnown RBP15.59■□□□□ 0.09
SHOX2-206ENST00000554685 ASB7Q9H672 318 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 PLEKHA5Q9HAU0 1116 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 TBX21Q9UL17 535 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 ITIH6Q6UXX5 1313 aa15.59■□□□□ 0.09
SHOX2-206ENST00000554685 TPM1P09493 284 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TRIM49P0CI25 452 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TRIM49CP0CI26 452 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 DLATP10515 647 aaKnown RBP15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TNNI1P19237 187 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 EN2P19622 333 aaPredicted RBP15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TNFSF9P41273 254 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 FMO5P49326 533 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 MXI1P50539 228 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 MYL7Q01449 175 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TRIM14Q14142 442 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 ZBTB41Q5SVQ8 909 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 SPECC1LQ69YQ0 1117 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 GBP6Q6ZN66 633 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 UBE2Q1Q7Z7E8 422 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 NT5DC4Q86YG4 428 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 WDR49Q8IV35 697 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 VSTM4Q8IW00 320 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 SEPT8Q92599 483 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TSPAN18Q96SJ8 248 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 EIF2AQ9BY44 585 aaKnown RBP15.58■□□□□ 0.08
SHOX2-206ENST00000554685 TMEM8AQ9HCN3 771 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 INTS13Q9NVM9 706 aa15.58■□□□□ 0.08
SHOX2-206ENST00000554685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.58■□□□□ 0.08
SHOX2-206ENST00000554685 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.58■□□□□ 0.08
SHOX2-206ENST00000554685 LRRIQ3A6PVS8 624 aaPredicted RBP15.57■□□□□ 0.08
SHOX2-206ENST00000554685 TEX33O43247 280 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 OSTNP61366 133 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 CLDN10P78369 228 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 DSC3Q14574 896 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 ENOX2Q16206 610 aaKnown RBP15.57■□□□□ 0.08
SHOX2-206ENST00000554685 SEZ6Q53EL9 994 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 UBXN11Q5T124 520 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 KRT39Q6A163 491 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 CEP120Q8N960 986 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 PGBD4Q96DM1 585 aa15.57■□□□□ 0.08
SHOX2-206ENST00000554685 PDLIM2Q96JY6 352 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms