RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 E9PMD0 336 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 MBTPS2O43462 519 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 EYA4O95677 639 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 CXCL14O95715 111 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 GLP2RO95838 553 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 ALDH2P05091 517 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 PRKCBP05771 671 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 TPM3P06753 285 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 MLH1P40692 756 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 SLC11A1P49279 550 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 AFF1P51825 1210 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 EFNA5P52803 228 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 PRPF4BQ13523 1007 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 ARL6IP4Q66PJ3 421 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 KANK3Q6NY19 840 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 MRPL43Q8N983 215 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 MSLNLQ96KJ4 702 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 NXF3Q9H4D5 531 aaKnown RBP13.65□□□□□ -0.22
SHMT2-214ENST00000554604 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 ZKSCAN5Q9Y2L8 839 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 FAN1Q9Y2M0 1017 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
SHMT2-214ENST00000554604 CITO14578 2027 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 N4BP3O15049 544 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 DDHD2O94830 711 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 AKAP5P24588 427 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 SCNN1GP51170 649 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 GRIN1Q05586 938 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 COASYQ13057 564 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 DHX40Q8IX18 779 aaKnown RBP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 DRC1Q96MC2 740 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 ZFP42Q96MM3 310 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 RPS6KC1Q96S38 1066 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 POP1Q99575 1024 aaKnown RBP13.64□□□□□ -0.23
SHMT2-214ENST00000554604 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 FZD8Q9H461 694 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
SHMT2-214ENST00000554604 C2orf71A6NGG8 1288 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 CCDC169A6NNP5 214 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 BECN2A8MW95 431 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 ACKR2O00590 384 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 B4GALT3O60512 393 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 CDC25BP30305 580 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 OR1G1P47890 313 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 ZP2Q05996 745 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 DMP1Q13316 513 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-214ENST00000554604 GIT2Q14161 759 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 VN1R2Q8NFZ6 395 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-214ENST00000554604 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 PLIN2Q99541 437 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 PYM1Q9BRP8 204 aaKnown RBP13.63□□□□□ -0.23
SHMT2-214ENST00000554604 MMTAG2Q9BU76 263 aaKnown RBP13.63□□□□□ -0.23
SHMT2-214ENST00000554604 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 C1QTNF1Q9BXJ1 281 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 ZBP1Q9H171 429 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
SHMT2-214ENST00000554604 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-214ENST00000554604 K7ERI5 159 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 NRP1O14786 923 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 INPPL1O15357 1258 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 HIP1RO75146 1068 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 CTSAP10619 480 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 UBA7P41226 1012 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 ZNF75DP51815 510 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 PEX3P56589 373 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 DPCR1Q3MIW9 517 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 APBB1IPQ7Z5R6 666 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-214ENST00000554604 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 KCTD17Q8N5Z5 321 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 RASSF8Q8NHQ8 419 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 CASP10Q92851 521 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms