RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ODF2LQ9ULJ1 636 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 BARX2Q9UMQ3 279 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-213ENST00000554600 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
SHMT2-213ENST00000554600 FSD2A1L4K1 749 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 H0YCG3 227 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 K7ENM7 598 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 C2CD2LO14523 706 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 SPTLC2O15270 562 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 INPPL1O15357 1258 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 F13A1P00488 732 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 PDIA4P13667 645 aaKnown RBP11.7□□□□□ -0.54
SHMT2-213ENST00000554600 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-213ENST00000554600 STAT6P42226 847 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 YARSP54577 528 aaKnown RBP11.7□□□□□ -0.54
SHMT2-213ENST00000554600 COL19A1Q14993 1142 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 TAS1R3Q7RTX0 852 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 COLGALT2Q8IYK4 626 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 PDILTQ8N807 584 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 MRPL43Q8N983 215 aaKnown RBP11.7□□□□□ -0.54
SHMT2-213ENST00000554600 LRRC15Q8TF66 581 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 RABGGTAQ92696 567 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 CCDC94Q9BW85 323 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-213ENST00000554600 COLEC11Q9BWP8 271 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 ZBP1Q9H171 429 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 CDT1Q9H211 546 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 PARVGQ9HBI0 331 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 STK17AQ9UEE5 414 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
SHMT2-213ENST00000554600 ZMYM2Q9UBW7 1377 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 GLP2RO95838 553 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 URODP06132 367 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 THP07101 528 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 CTSAP10619 480 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 MAPTP10636 758 aaKnown RBP11.69□□□□□ -0.54
SHMT2-213ENST00000554600 DDIT3P35638 169 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 NASPP49321 788 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-213ENST00000554600 DSC1Q08554 894 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 SMAD4Q13485 552 aaKnown RBP11.69□□□□□ -0.54
SHMT2-213ENST00000554600 GIT2Q14161 759 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 KIAA1841Q6NSI8 718 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 MPZL3Q6UWV2 235 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 SV2BQ7L1I2 683 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 DYMQ7RTS9 669 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 CEP120Q8N960 986 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 LINC00301Q8NCQ3 95 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 TMEM161BQ8NDZ6 487 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 ZBTB45Q96K62 511 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-213ENST00000554600 APOL5Q9BWW9 433 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 VN1R3Q9BXE9 311 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 MARCH5Q9NX47 278 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 CACNG4Q9UBN1 327 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 STK39Q9UEW8 545 aa11.69□□□□□ -0.54
SHMT2-213ENST00000554600 F8W810 466 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 MBTPS2O43462 519 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 TRAK2O60296 914 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
SHMT2-213ENST00000554600 TADA2AO75478 443 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 MCF2P10911 925 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 LIG4P49917 911 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 NCKAP1LP55160 1127 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 TUSC3Q13454 348 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 PKP1Q13835 747 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 HSP90AA2PQ14568 343 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-213ENST00000554600 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
SHMT2-213ENST00000554600 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 GSTCDQ8NEC7 633 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 VN1R2Q8NFZ6 395 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 HASPINQ8TF76 798 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 ACAP3Q96P50 834 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 NTPCRQ9BSD7 190 aaKnown RBP11.68□□□□□ -0.54
SHMT2-213ENST00000554600 EMILIN2Q9BXX0 1053 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 CXCL16Q9H2A7 254 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 MRPL17Q9NRX2 175 aaKnown RBP11.68□□□□□ -0.54
SHMT2-213ENST00000554600 TOPORSQ9NS56 1045 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-213ENST00000554600 CLEC1BQ9P126 229 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 PIEZO1Q92508 2521 aa11.68□□□□□ -0.54
SHMT2-213ENST00000554600 PTGESO14684 152 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 HNRNPDLO14979 420 aaKnown RBP11.67□□□□□ -0.54
SHMT2-213ENST00000554600 CLDN3O15551 220 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 TOM1L1O75674 476 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 YEATS4O95619 227 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 SOD2P04179 222 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 IDEP14735 1019 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 KLRC2P26717 231 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 NMT1P30419 496 aaKnown RBP11.67□□□□□ -0.54
SHMT2-213ENST00000554600 GRM5P41594 1212 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 ME1P48163 572 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 GLUD2P49448 558 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 SEZ6Q53EL9 994 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 ANKRD54Q6NXT1 300 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 FUT10Q6P4F1 479 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms