RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CHRNA3P32297 505 aa16.83■□□□□ 0.29
ARHGEF40-203ENST00000554514 AGBL2Q5U5Z8 902 aa16.83■□□□□ 0.29
ARHGEF40-203ENST00000554514 TEX2Q8IWB9 1127 aa16.83■□□□□ 0.29
ARHGEF40-203ENST00000554514 C12orf56Q8IXR9 622 aa16.83■□□□□ 0.29
ARHGEF40-203ENST00000554514 DNAJC17Q9NVM6 304 aaKnown RBP16.83■□□□□ 0.29
ARHGEF40-203ENST00000554514 RARAP10276 462 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 TRIP13Q15645 432 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 EMC10Q5UCC4 262 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 SLC39A4Q6P5W5 647 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 NIPA1Q7RTP0 329 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 NLRX1Q86UT6 975 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 FBXL13Q8NEE6 735 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 HELQQ8TDG4 1101 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 SHC3Q92529 594 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 EPB41L4BQ9H329 900 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 RAB20Q9NX57 234 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 STK32BQ9NY57 414 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 GRHL1Q9NZI5 618 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 PPP1R7Q15435 360 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 PPP2R5EQ16537 467 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 SWSAP1Q6NVH7 229 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 MICALCLQ6ZW33 695 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 CPA5Q8WXQ8 436 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 IWS1Q96ST2 819 aa16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 SEPT9Q9UHD8 586 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-203ENST00000554514 ADGRA3Q8IWK6 1321 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 ZBED4O75132 1171 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 JAK3P52333 1124 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 PRAMEF18Q5VWM3 479 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 SLC13A5Q86YT5 568 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 EPS8L3Q8TE67 593 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 WNT8AQ9H1J5 351 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 PABPC3Q9H361 631 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 TMEM8AQ9HCN3 771 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 RNF146Q9NTX7 359 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 ANAPC7Q9UJX3 599 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 GJC1P36383 396 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 IFI35P80217 286 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 CDR2Q01850 454 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 CCDC38Q502W7 563 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 ATG4AQ8WYN0 398 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 RPS6KC1Q96S38 1066 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 FAM118BQ9BPY3 351 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 TXLNGYQ9BZA5 131 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 PGAP2Q9UHJ9 254 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 MTUS1Q9ULD2 1270 aa16.82■□□□□ 0.28
ARHGEF40-203ENST00000554514 TRAPPC3O43617 180 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 ZNF862O60290 1169 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 CTNNA2P26232 953 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 COILP38432 576 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 VPS41P49754 854 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 HADHBP55084 474 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 KRT76Q01546 638 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 CPLX4Q7Z7G2 160 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 HOOK3Q86VS8 718 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 MAP4K3Q8IVH8 894 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 MTRF1LQ9UGC7 380 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 LYPLA2O95372 231 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 GZMAP12544 262 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 SPOPLQ6IQ16 392 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 PASD1Q8IV76 773 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 LPAR1Q92633 364 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 MOV10L1Q9BXT6 1211 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 PCDHA10Q9Y5I2 948 aa16.81■□□□□ 0.28
ARHGEF40-203ENST00000554514 RGS16O15492 202 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 CTNND1O60716 968 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 MAPK4P31152 587 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 RWDD2BP57060 319 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 CYP24A1Q07973 514 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 CD101Q93033 1021 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 VTI1AQ96AJ9 217 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 CYP1A2P05177 515 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 EIF3BP55884 814 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 MTERF2Q49AM1 385 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 KIFAP3Q92845 792 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 KIAA1683Q9H0B3 1180 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 GTF3C4Q9UKN8 822 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 NR3C2P08235 984 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 CHN1P15882 459 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 TNNI1P19237 187 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 SGO2Q562F6 1265 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 CABS1Q96KC9 395 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 ST6GALNAC4Q9H4F1 302 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 ASIC3Q9UHC3 531 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 PCDHA3Q9Y5H8 950 aa16.8■□□□□ 0.28
ARHGEF40-203ENST00000554514 ACSL3O95573 720 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 HSPA6P17066 643 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 SFNP31947 248 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 SSR1P43307 286 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 ACOT2P49753 483 aa16.79■□□□□ 0.28
ARHGEF40-203ENST00000554514 GPC3P51654 580 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms