RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 OR5B17Q8NGF7 314 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 PPTC7Q8NI37 304 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 NENFQ9UMX5 172 aa13.78□□□□□ -0.2
VIPAS39-206ENST00000553888 INO80B-WBP1J3KQ70 363 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 CYP26A1O43174 497 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 PALMO75781 387 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 PIGRP01833 764 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 PRKCBP05771 671 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 MAPK4P31152 587 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 CYP2C19P33261 490 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 NAB2Q15742 525 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 RSRC2Q7L4I2 434 aaKnown RBP13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 CEP120Q8N960 986 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 FBXL13Q8NEE6 735 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 HELQQ8TDG4 1101 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 COG1Q8WTW3 980 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 FAM212AQ96EL1 285 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 MMS19Q96T76 1030 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 INO80BQ9C086 356 aaPredicted RBP13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 SAR1BQ9Y6B6 198 aa13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 BZW2Q9Y6E2 419 aaKnown RBP13.77□□□□□ -0.2
VIPAS39-206ENST00000553888 EFCAB8A8MWE9 144 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 P4HA2O15460 535 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 PAPD7Q5XG87 772 aaKnown RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 CDCA2Q69YH5 1023 aaPredicted RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 ZNF467Q7Z7K2 595 aaPredicted RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 SLC47A2Q86VL8 602 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 OR6J1Q8NGC5 347 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 SLC30A5Q8TAD4 765 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 CHORDC1Q9UHD1 332 aaPredicted RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 CLDN3O15551 220 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 CYP2B6P20813 491 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 ABCB4P21439 1286 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 EEF1DP3Q658K8 133 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 RGMBQ6NW40 437 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 PDCL2Q8N4E4 241 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 TRIM58Q8NG06 486 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.21
VIPAS39-206ENST00000553888 FAM189A1O60320 539 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 VNN1O95497 513 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 MMP3P08254 477 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 GPC3P51654 580 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 BIRC3Q13489 604 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 PSMD6Q15008 389 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 TCP11Q8WWU5 503 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 COQ4Q9Y3A0 265 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 CNTNAP2Q9UHC6 1331 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 GRID2IPA4D2P6 1211 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 H3BRB1 525 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 ABLIM1O14639 778 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 DYNC1LI2O43237 492 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 CTGFP29279 349 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 GALCP54803 685 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 MCCD1P59942 119 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 MXD4Q14582 209 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 KIF22Q14807 665 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 MAPK6Q16659 721 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 MORN1Q5T089 497 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 NOP9Q86U38 636 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 TLR10Q9BXR5 811 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 MRPL4Q9BYD3 311 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 TUT1Q9H6E5 874 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-206ENST00000553888 TRIP11Q15643 1979 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 UMODL1Q5DID0 1318 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 A0A087WZ62 844 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 HLA-DRAP01903 254 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 C4BPAP04003 597 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 SLC26A2P50443 739 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 NT5C1BQ96P26 610 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 FDXACB1Q9BRP7 624 aaPredicted RBP13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 OSGEPQ9NPF4 335 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 AKT3Q9Y243 479 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 TNFAIP3P21580 790 aa13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-206ENST00000553888 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms