RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 PLA2G4FQ68DD2 849 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 CNNM3Q8NE01 707 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 LNX1Q8TBB1 728 aaPredicted RBP10.76□□□□□ -0.69
CHD8-205ENST00000553651 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
CHD8-205ENST00000553651 PIK3R5Q8WYR1 880 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 PAAF1Q9BRP4 392 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 COLEC11Q9BWP8 271 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 TEKT3Q9BXF9 490 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
CHD8-205ENST00000553651 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
CHD8-205ENST00000553651 RAB23Q9ULC3 237 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 DDX11L8A8MPP1 907 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 TSPAN1O60635 241 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 NPEPPSP55786 919 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 SATB1Q01826 763 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 AAMPQ13685 434 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 AMHR2Q16671 573 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 SLC5A9Q2M3M2 681 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 PPM1LQ5SGD2 360 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 CREB3L3Q68CJ9 461 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 TANGO2Q6ICL3 276 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 PRR23BQ6ZRT6 265 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 ING5Q8WYH8 240 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 DDX1Q92499 740 aaKnown RBP10.75□□□□□ -0.69
CHD8-205ENST00000553651 DNASE1L2Q92874 299 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 TMEM143Q96AN5 459 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 CCDC136Q96JN2 1154 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 IER2Q9BTL4 223 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 NXF3Q9H4D5 531 aaKnown RBP10.75□□□□□ -0.69
CHD8-205ENST00000553651 RXFP3Q9NSD7 469 aa10.75□□□□□ -0.69
CHD8-205ENST00000553651 WRAP73Q9P2S5 460 aaPredicted RBP10.75□□□□□ -0.69
CHD8-205ENST00000553651 MRPS17Q9Y2R5 130 aaKnown RBP10.75□□□□□ -0.69
CHD8-205ENST00000553651 ITPR1Q14643 2758 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 K7ESF4 209 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 ZBTB43O43298 467 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 SRGAP2CP0DJJ0 459 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 HOXC13P31276 330 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 ADD1P35611 737 aaKnown RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 SIM2Q14190 667 aaPredicted RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 PABPC1LQ4VXU2 614 aaKnown RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 WDR44Q5JSH3 913 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 LIN9Q5TKA1 542 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 DIEXFQ68CQ4 756 aaKnown RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 SLC7A14Q8TBB6 771 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 ETNPPLQ8TBG4 499 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 ELSPBP1Q96BH3 223 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 TCEANC2Q96MN5 208 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 AVENQ9NQS1 362 aaPredicted RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 NDRG2Q9UN36 371 aaKnown RBP10.74□□□□□ -0.69
CHD8-205ENST00000553651 WASF3Q9UPY6 502 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 GIT1Q9Y2X7 761 aa10.74□□□□□ -0.69
CHD8-205ENST00000553651 GOLGA8AA7E2F4 631 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 GOLGA8BA8MQT2 603 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 CHURC1-FNTBB4DL54 471 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 EML1O00423 815 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 XYLBO75191 536 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 PAPSS2O95340 614 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 CHRNB1P11230 501 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 CEBPBP17676 345 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 IGFBP6P24592 240 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 FNTBP49356 437 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 CCR3P51677 355 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 USP11P51784 963 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 PSMC5P62195 406 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 GRIK3Q13003 919 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 RAB33AQ14088 237 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 HSP90AA2PQ14568 343 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 NAB2Q15742 525 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 PSMD5Q16401 504 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 UVSSAQ2YD98 709 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 Q4G0T1 1027 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 AXDND1Q5T1B0 1012 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 IFNLR1Q8IU57 520 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 MAP4K3Q8IVH8 894 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 FAM160A2Q8N612 972 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 RNF149Q8NC42 400 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 CCDC51Q96ER9 411 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 MCRS1Q96EZ8 462 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 JPH2Q9BR39 696 aaPredicted RBP10.73□□□□□ -0.69
CHD8-205ENST00000553651 TTPALQ9BTX7 342 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 LMAN1LQ9HAT1 526 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 TRPV5Q9NQA5 729 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 C2orf42Q9NWW7 574 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 GDE1Q9NZC3 331 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 POLIQ9UNA4 740 aa10.73□□□□□ -0.69
CHD8-205ENST00000553651 TICRRQ7Z2Z1 1910 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms