RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PRSS55Q6UWB4 352 aaPredicted RBP20.06■□□□□ 0.8
SHMT2-206ENST00000553529 TMC5Q6UXY8 1006 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 SYT2Q8N9I0 419 aaPredicted RBP20.06■□□□□ 0.8
SHMT2-206ENST00000553529 EPSTI1Q96J88 318 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 HAPLN2Q9GZV7 340 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 UBN1Q9NPG3 1134 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 KMT5AQ9NQR1 393 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 ARHGAP28Q9P2N2 729 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 MTMR6Q9Y217 621 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 FAM50BQ9Y247 325 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 MYH11P35749 1972 aa20.06■□□□□ 0.8
SHMT2-206ENST00000553529 PHLPP2Q6ZVD8 1323 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 K7ERI5 159 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 TEX28O15482 410 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 CLCN4P51793 760 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 SOX4Q06945 474 aaPredicted RBP20.05■□□□□ 0.8
SHMT2-206ENST00000553529 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
SHMT2-206ENST00000553529 KIAA0319Q5VV43 1072 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 FUT10Q6P4F1 479 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 FOXD4L4Q8WXT5 416 aaPredicted RBP20.05■□□□□ 0.8
SHMT2-206ENST00000553529 CASP10Q92851 521 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 RPS6KC1Q96S38 1066 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 ACO2Q99798 780 aaKnown RBP20.05■□□□□ 0.8
SHMT2-206ENST00000553529 PHF7Q9BWX1 381 aaPredicted RBP20.05■□□□□ 0.8
SHMT2-206ENST00000553529 IKZF4Q9H2S9 585 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 PTPRHQ9HD43 1115 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 IRAK3Q9Y616 596 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 VWA8A3KMH1 1905 aa20.05■□□□□ 0.8
SHMT2-206ENST00000553529 DCXO43602 365 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 KLRC2P26717 231 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 DMP1Q13316 513 aaPredicted RBP20.04■□□□□ 0.8
SHMT2-206ENST00000553529 ZNF568Q3ZCX4 644 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 RTP2Q5QGT7 225 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 ARL6IP4Q66PJ3 421 aaKnown RBP20.04■□□□□ 0.8
SHMT2-206ENST00000553529 CD300LGQ6UXG3 332 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 C3orf58Q8NDZ4 430 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 ZMAT2Q96NC0 199 aaKnown RBP20.04■□□□□ 0.8
SHMT2-206ENST00000553529 REEP2Q9BRK0 252 aa20.04■□□□□ 0.8
SHMT2-206ENST00000553529 DENND4AQ7Z401 1863 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 I3L4J1 428 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 K7ELQ4 463 aaPredicted RBP20.03■□□□□ 0.8
SHMT2-206ENST00000553529 ADAM12O43184 909 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 URODP06132 367 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 GUCY2CP25092 1073 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 GLUD2P49448 558 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 TMEM31Q5JXX7 168 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 BRAPQ7Z569 592 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 GPBP1Q86WP2 473 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 TMEM161BQ8NDZ6 487 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 CDK5RAP3Q96JB5 506 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 USP28Q96RU2 1077 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 C1QTNF1Q9BXJ1 281 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 ADAM7Q9H2U9 754 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 MRPL17Q9NRX2 175 aaKnown RBP20.03■□□□□ 0.8
SHMT2-206ENST00000553529 FBXO2Q9UK22 296 aaPredicted RBP20.03■□□□□ 0.8
SHMT2-206ENST00000553529 ADAM28Q9UKQ2 775 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 TNFSF13BQ9Y275 285 aa20.03■□□□□ 0.8
SHMT2-206ENST00000553529 MYH15Q9Y2K3 1946 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 C2CD4DB7Z1M9 353 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 RFPL2O75678 378 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 PLS3P13797 630 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 EFNA5P52803 228 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 SPAG1Q07617 926 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 TUSC3Q13454 348 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 HSP90AA2PQ14568 343 aaPredicted RBP20.02■□□□□ 0.8
SHMT2-206ENST00000553529 ZBTB41Q5SVQ8 909 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 PALB2Q86YC2 1186 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 HACE1Q8IYU2 909 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 SPRYD3Q8NCJ5 442 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
SHMT2-206ENST00000553529 RSPH1Q8WYR4 309 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 DRC1Q96MC2 740 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 FBXL18Q96ME1 805 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 ADPGKQ9BRR6 497 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 MAN1C1Q9NR34 630 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 CHST7Q9NS84 486 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 ANKFY1Q9P2R3 1169 aa20.02■□□□□ 0.8
SHMT2-206ENST00000553529 A0A087X0B3 334 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 MAPTP10636 758 aaKnown RBP20.01■□□□□ 0.79
SHMT2-206ENST00000553529 PROZP22891 400 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 CLCNKBP51801 687 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 DSG1Q02413 1049 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 DCAF4L1Q3SXM0 396 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 TMEM87AQ8NBN3 555 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 RIN2Q8WYP3 895 aaPredicted RBP20.01■□□□□ 0.79
SHMT2-206ENST00000553529 C18orf25Q96B23 403 aaPredicted RBP20.01■□□□□ 0.79
SHMT2-206ENST00000553529 PPP1R10Q96QC0 940 aaKnown RBP20.01■□□□□ 0.79
SHMT2-206ENST00000553529 COLEC11Q9BWP8 271 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 MRPL4Q9BYD3 311 aaKnown RBP20.01■□□□□ 0.79
SHMT2-206ENST00000553529 TMEM134Q9H6X4 195 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 STK24Q9Y6E0 443 aa20.01■□□□□ 0.79
SHMT2-206ENST00000553529 TISP43B9A030 160 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 GPR37L1O60883 481 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 THP07101 528 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 SRGAP2BP0DMP2 458 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 UBA7P41226 1012 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 BRCC3P46736 316 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
SHMT2-206ENST00000553529 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms