RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 FOXD4L5Q5VV16 416 aaPredicted RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 PTCRAQ6ISU1 281 aaPredicted RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 SHC4Q6S5L8 630 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 CD300LGQ6UXG3 332 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 ZPBP2Q6X784 338 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 TAS1R1Q7RTX1 841 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 TMC7Q7Z402 723 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 HAUS6Q7Z4H7 955 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 SPRYD3Q8NCJ5 442 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 SMRP1Q8NCR6 262 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 MICAL1Q8TDZ2 1067 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 FOXD4L4Q8WXT5 416 aaPredicted RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 AUTS2Q8WXX7 1259 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 PPP2R3CQ969Q6 453 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 ZNF396Q96N95 335 aaPredicted RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 PPP1R10Q96QC0 940 aaKnown RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 UHRF1Q96T88 793 aaPredicted RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 ADPGKQ9BRR6 497 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 ST6GALNAC4Q9H4F1 302 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 PARVGQ9HBI0 331 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 CD320Q9NPF0 282 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 ENTPD7Q9NQZ7 604 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 FRMD3A2A2Y4 597 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 MBTPS2O43462 519 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 FAM189A1O60320 539 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 CLASP2O75122 1294 aaKnown RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 TOM1L1O75674 476 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 PPP1R37O75864 691 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 MCF2P10911 925 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 IGFBP6P24592 240 aaPredicted RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 GTF2BQ00403 316 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 MCL1Q07820 350 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 DHX8Q14562 1220 aaKnown RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 STK38Q15208 465 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 PUS10Q3MIT2 529 aaKnown RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 CHST7Q9NS84 486 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 CACNG4Q9UBN1 327 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 BARX2Q9UMQ3 279 aaPredicted RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 PRG3Q9Y2Y8 225 aaPredicted RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 MYH11P35749 1972 aa21.16■□□□□ 0.98
PTCH1-227ENST00000553256 TDRD15B5MCY1 1934 aaKnown RBP21.16■□□□□ 0.98
PTCH1-227ENST00000553256 SOD2P04179 222 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 SMTNP53814 917 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 TUSC3Q13454 348 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 SMAD2Q15796 467 aaKnown RBP21.15■□□□□ 0.98
PTCH1-227ENST00000553256 KIAA0319Q5VV43 1072 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 RRAGBQ5VZM2 374 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 ATL3Q6DD88 541 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 SLC39A4Q6P5W5 647 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 SYCE2Q6PIF2 218 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 MPZL3Q6UWV2 235 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 FAM178BQ8IXR5 827 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 SLC22A17Q8WUG5 538 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 FAM193BQ96PV7 902 aaPredicted RBP21.15■□□□□ 0.98
PTCH1-227ENST00000553256 HERC2P3Q9BVR0 1158 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 S1PR5Q9H228 398 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 CCDC39Q9UFE4 941 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 RCOR1Q9UKL0 485 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 TBX20Q9UMR3 447 aa21.15■□□□□ 0.98
PTCH1-227ENST00000553256 TRAK2O60296 914 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 CXCL14O95715 111 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 SCP2P22307 547 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 OR1G1P47890 313 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 DNM1Q05193 864 aaKnown RBP21.14■□□□□ 0.97
PTCH1-227ENST00000553256 SMAD4Q13485 552 aaKnown RBP21.14■□□□□ 0.97
PTCH1-227ENST00000553256 ZNF568Q3ZCX4 644 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 SUSD6Q92537 303 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 DDX12PQ92771 950 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 ZMAT2Q96NC0 199 aaKnown RBP21.14■□□□□ 0.97
PTCH1-227ENST00000553256 GPR62Q9BZJ7 368 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 STK39Q9UEW8 545 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 CD207Q9UJ71 328 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 GDAQ9Y2T3 454 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 HCFC2Q9Y5Z7 792 aa21.14■□□□□ 0.97
PTCH1-227ENST00000553256 SMIM28A0A1B0GU29 152 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 FSD2A1L4K1 749 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 C19orf67A6NJJ6 358 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 CUTAO60888 179 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 HSP90AA1P07900 732 aaKnown RBP21.13■□□□□ 0.97
PTCH1-227ENST00000553256 NMT1P30419 496 aaKnown RBP21.13■□□□□ 0.97
PTCH1-227ENST00000553256 CCDC73Q6ZRK6 1079 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 MAP4K3Q8IVH8 894 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 GPR65Q8IYL9 337 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 MYCT1Q8N699 235 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 RABGGTAQ92696 567 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 CHAMP1Q96JM3 812 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 SNX27Q96L92 541 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 PANK2Q9BZ23 570 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 RXFP1Q9HBX9 757 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 KBTBD4Q9NVX7 518 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 PCDHA7Q9UN72 937 aa21.13■□□□□ 0.97
PTCH1-227ENST00000553256 H0YCG3 227 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 TNFRSF10AO00220 468 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 FAM13AO94988 1023 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 THP07101 528 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 ADRB2P07550 413 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 KCNE1P15382 129 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 NDUFV1P49821 464 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 DSG1Q02413 1049 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 SOX4Q06945 474 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms