RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 TNNT1P13805 278 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 HTRA4P83105 476 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-234ENST00000552645 PNOCQ13519 176 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 CLLU1OSQ5K130 101 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 GLB1LQ6UWU2 654 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 SPRED2Q7Z698 418 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
LETMD1-234ENST00000552645 SYCP3Q8IZU3 236 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
LETMD1-234ENST00000552645 GLIS3Q8NEA6 775 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 ENGASEQ8NFI3 743 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 ERCC4Q92889 916 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-234ENST00000552645 ZBTB45Q96K62 511 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-234ENST00000552645 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 GBP3Q9H0R5 595 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 IKZF4Q9H2S9 585 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 SLC39A2Q9NP94 309 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 OLFML3Q9NRN5 406 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 RNF19AQ9NV58 838 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 FEZ2Q9UHY8 353 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-234ENST00000552645 TNFSF13BQ9Y275 285 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 PCDHB13Q9Y5F0 798 aa10.87□□□□□ -0.67
LETMD1-234ENST00000552645 CDH23Q9H251 3354 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 CLDN3O15551 220 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 ZNF623O75123 536 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 PRPF6O94906 941 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 RPN1P04843 607 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 MLH1P40692 756 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 GTF2BQ00403 316 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 TAP1Q03518 808 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 RNASELQ05823 741 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 KCNA1Q09470 495 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 POSTNQ15063 836 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 KMT5BQ4FZB7 885 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 SEZ6Q53EL9 994 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 MPZL3Q6UWV2 235 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 AGMOQ6ZNB7 445 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 STXBP4Q6ZWJ1 553 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 THNSL1Q8IYQ7 743 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 DEFB123Q8N688 67 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 ARNTL2Q8WYA1 636 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 CCDC47Q96A33 483 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 ACCSQ96QU6 501 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 CDT1Q9H211 546 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 RSAD1Q9HA92 442 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 SNTG2Q9NY99 539 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 HOOK1Q9UJC3 728 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 MRPL42Q9Y6G3 142 aaKnown RBP10.86□□□□□ -0.67
LETMD1-234ENST00000552645 COL4A6Q14031 1691 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 RALGAPA2Q2PPJ7 1873 aa10.86□□□□□ -0.67
LETMD1-234ENST00000552645 PVALEFA0A1B0GWK0 134 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 TISP43B9A030 160 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 TOM1L1O75674 476 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 POMCP01189 267 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 MYL1P05976 194 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 SCP2P22307 547 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 CDC25BP30305 580 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 ABCD1P33897 745 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 CTNNB1P35222 781 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 DCAF4L1Q3SXM0 396 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 ZPBP2Q6X784 338 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 MRPL10Q7Z7H8 261 aaKnown RBP10.85□□□□□ -0.67
LETMD1-234ENST00000552645 NELFCDQ8IXH7 590 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 CMTR2Q8IYT2 770 aaKnown RBP10.85□□□□□ -0.67
LETMD1-234ENST00000552645 CEP120Q8N960 986 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 FAM200AQ8TCP9 573 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 URGCPQ8TCY9 931 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-234ENST00000552645 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 CASD1Q96PB1 797 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 GAD1Q99259 594 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 C17orf80Q9BSJ5 609 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 TMEM117Q9H0C3 514 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 TTYH1Q9H313 450 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-234ENST00000552645 TYW1Q9NV66 732 aaKnown RBP10.85□□□□□ -0.67
LETMD1-234ENST00000552645 GEMIN8Q9NWZ8 242 aaKnown RBP10.85□□□□□ -0.67
LETMD1-234ENST00000552645 EXOC7Q9UPT5 735 aa10.85□□□□□ -0.67
LETMD1-234ENST00000552645 ARL5CA6NH57 179 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 ANKRD63C9JTQ0 380 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 AP5Z1O43299 807 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 KLRC4O43908 158 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 RECQL4O94761 1208 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 CSPG5O95196 566 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 AFF1P51825 1210 aaKnown RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 DPYDQ12882 1025 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 ALCAMQ13740 583 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 NOMO2Q5JPE7 1267 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 MAP4K3Q8IVH8 894 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms