RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 TXNDC11Q6PKC3 985 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 CACNA2D4Q7Z3S7 1137 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 SMG8Q8ND04 991 aaKnown RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 DEFB124Q8NES8 71 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 RRP36Q96EU6 259 aaKnown RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 ZFP42Q96MM3 310 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 SCLT1Q96NL6 688 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 GCOM2Q9BZD3 368 aaPredicted RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 IL25Q9H293 177 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 BRD9Q9H8M2 597 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 VPS45Q9NRW7 570 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 POLR3BQ9NW08 1133 aaPredicted RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 KCNH3Q9ULD8 1083 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 GON4LQ3T8J9 2241 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 USP9XQ93008 2570 aaPredicted RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 SHROOM3Q8TF72 1996 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 IGLV3-22A0A075B6J6 115 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 FAM221BA6H8Z2 402 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 TMEM150BA6NC51 233 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 SKIP12755 728 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 HOXA9P31269 272 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 RAB27AP51159 221 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 ERICH6BQ5W0A0 696 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 VITQ6UXI7 678 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 GPR65Q8IYL9 337 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 LNX1Q8TBB1 728 aaPredicted RBP11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 PGBD4Q96DM1 585 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 TCEAL4Q96EI5 215 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 ZC3H10Q96K80 434 aaKnown RBP11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 ZSWIM3Q96MP5 696 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 KANSL3Q9P2N6 904 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 PCDHGA5Q9Y5G8 931 aa11.51□□□□□ -0.57
SLC48A1-209ENST00000552003 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 ADAMTS3O15072 1205 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 RHOP08100 348 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 POU2F2P09086 479 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 SDSP20132 328 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 GDI1P31150 447 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 CCR2P41597 374 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 SCNN1GP51170 649 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 PDE1AP54750 535 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 PLK5Q496M5 336 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 PRSS36Q5K4E3 855 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 GLIS3Q8NEA6 775 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 HNRNPLLQ8WVV9 542 aaKnown RBP11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 CRELD1Q96HD1 420 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 GAD1Q99259 594 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 TRMT61BQ9BVS5 477 aaKnown RBP11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 DUSP15Q9H1R2 295 aaPredicted RBP11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 CNNM2Q9H8M5 875 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 MINDY3Q9H8M7 445 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 TRPV5Q9NQA5 729 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 AGPAT5Q9NUQ2 364 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 GDE1Q9NZC3 331 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 MRPS23Q9Y3D9 190 aaKnown RBP11.5□□□□□ -0.57
SLC48A1-209ENST00000552003 IGKV6-21A0A0C4DH24 114 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 SPAARA0A1B0GVQ0 90 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 ARL5CA6NH57 179 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 PATE3B3GLJ2 98 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 IPO5O00410 1097 aaKnown RBP11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 DCLK1O15075 740 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 STBD1O95210 358 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 OATP04181 439 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 SFPQP23246 707 aaKnown RBP eCLIP11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 IGFBP6P24592 240 aaPredicted RBP11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 MLH1P40692 756 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 VIPR2P41587 438 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 ANTXR2P58335 489 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 IMMTQ16891 758 aaKnown RBP11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 AXDND1Q5T1B0 1012 aaPredicted RBP11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 CATSPER4Q7RTX7 472 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 RSPRY1Q96DX4 576 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 HES2Q9Y543 173 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 CNTNAP2Q9UHC6 1331 aa11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 KIF26AQ9ULI4 1882 aaPredicted RBP11.49□□□□□ -0.57
SLC48A1-209ENST00000552003 XYLBO75191 536 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 SMARCA1P28370 1054 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 FGD1P98174 961 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 PRKCEQ02156 737 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 SCAPQ12770 1279 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 LIN9Q5TKA1 542 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 DAB2IPQ5VWQ8 1189 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms