RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 F8W810 466 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 CCL16O15467 120 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 TDGF1P13385 188 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 CDC27P30260 824 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
CACNB3-220ENST00000551716 AKAP17AQ02040 695 aaKnown RBP17.05■□□□□ 0.32
CACNB3-220ENST00000551716 GRIK3Q13003 919 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 LPAL2Q16609 132 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 PABPC1LQ4VXU2 614 aaKnown RBP17.05■□□□□ 0.32
CACNB3-220ENST00000551716 B3GNT9Q6UX72 402 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 NPAS3Q8IXF0 933 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 RNF149Q8NC42 400 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 CLSTN3Q9BQT9 956 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 CSRNP2Q9H175 543 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 DHX33Q9H6R0 707 aaKnown RBP17.05■□□□□ 0.32
CACNB3-220ENST00000551716 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
CACNB3-220ENST00000551716 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
CACNB3-220ENST00000551716 MRPS23Q9Y3D9 190 aaKnown RBP17.05■□□□□ 0.32
CACNB3-220ENST00000551716 ZMYM2Q9UBW7 1377 aa17.04■□□□□ 0.32
CACNB3-220ENST00000551716 MTCL1Q9Y4B5 1905 aaKnown RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 KLF18A0A0U1RQI7 1052 aa17.04■□□□□ 0.32
CACNB3-220ENST00000551716 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 PMLP29590 882 aa17.04■□□□□ 0.32
CACNB3-220ENST00000551716 QARSP47897 775 aaKnown RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 ELAVL2Q12926 359 aaKnown RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 COL9A2Q14055 689 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 PRSS55Q6UWB4 352 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 TMEM143Q96AN5 459 aa17.04■□□□□ 0.32
CACNB3-220ENST00000551716 ELSPBP1Q96BH3 223 aa17.04■□□□□ 0.32
CACNB3-220ENST00000551716 CEP170P1Q96L14 293 aa17.04■□□□□ 0.32
CACNB3-220ENST00000551716 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
CACNB3-220ENST00000551716 CYP3A7-CYP3A51PA0A087WV96 503 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 CYP3A7P24462 503 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
CACNB3-220ENST00000551716 CXCL12P48061 93 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 LIMK1P53667 647 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 MXD4Q14582 209 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-220ENST00000551716 PSMD5Q16401 504 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 RTP2Q5QGT7 225 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-220ENST00000551716 FAM171A1Q5VUB5 890 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 OTUD6AQ7L8S5 288 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 FERMT3Q86UX7 667 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 LNX1Q8TBB1 728 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-220ENST00000551716 AVENQ9NQS1 362 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-220ENST00000551716 HES2Q9Y543 173 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 PATJQ8NI35 1801 aa17.03■□□□□ 0.32
CACNB3-220ENST00000551716 EDIL3O43854 480 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 TSPAN1O60635 241 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 KCNA4P22459 653 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 NPEPPSP55786 919 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 PTENP60484 403 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 POU5F1BQ06416 359 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 RAB33AQ14088 237 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 TFDP1Q14186 410 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 PLA2G4FQ68DD2 849 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-220ENST00000551716 CEP57Q86XR8 500 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 GSTCDQ8NEC7 633 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 SLC7A14Q8TBB6 771 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 IRF7Q92985 503 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 GJA10Q969M2 543 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 APOL6Q9BWW8 343 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 BRD9Q9H8M2 597 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 LMAN1LQ9HAT1 526 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
CACNB3-220ENST00000551716 DNMT3BQ9UBC3 853 aaKnown RBP17.02■□□□□ 0.32
CACNB3-220ENST00000551716 NAP1L2Q9ULW6 460 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-220ENST00000551716 NDRG2Q9UN36 371 aaKnown RBP17.02■□□□□ 0.32
CACNB3-220ENST00000551716 CNOT1A5YKK6 2376 aaKnown RBP17.01■□□□□ 0.31
CACNB3-220ENST00000551716 PROS1P07225 676 aa17.01■□□□□ 0.31
CACNB3-220ENST00000551716 P4HBP07237 508 aaKnown RBP17.01■□□□□ 0.31
CACNB3-220ENST00000551716 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
CACNB3-220ENST00000551716 FGD1P98174 961 aa17.01■□□□□ 0.31
CACNB3-220ENST00000551716 N4BP2L1Q5TBK1 243 aaPredicted RBP17.01■□□□□ 0.31
CACNB3-220ENST00000551716 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
CACNB3-220ENST00000551716 FAM3CQ92520 227 aa17.01■□□□□ 0.31
CACNB3-220ENST00000551716 MCRS1Q96EZ8 462 aa17.01■□□□□ 0.31
CACNB3-220ENST00000551716 TRMT61BQ9BVS5 477 aaKnown RBP17.01■□□□□ 0.31
CACNB3-220ENST00000551716 MYH15Q9Y2K3 1946 aa17.01■□□□□ 0.31
CACNB3-220ENST00000551716 INO80B-WBP1J3KQ70 363 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 MLLT6P55198 1093 aaPredicted RBP17■□□□□ 0.31
CACNB3-220ENST00000551716 TUSC3Q13454 348 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 TANGO2Q6ICL3 276 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 C1orf228Q6PIY5 440 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 MOXD1Q6UVY6 613 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 LONP2Q86WA8 852 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 IFNLR1Q8IU57 520 aaPredicted RBP17■□□□□ 0.31
CACNB3-220ENST00000551716 CPB2Q96IY4 423 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 PLA2G2FQ9BZM2 168 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 ZFP14Q9HCL3 533 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
CACNB3-220ENST00000551716 SHISA7A6NL88 538 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 HRO43593 1189 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 GDF9O60383 454 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 MICAL2O94851 1124 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms