RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 WNT7BP56706 349 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 GTF2BQ00403 316 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 TFF2Q03403 129 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-208ENST00000550283 EHHADHQ08426 723 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 HYAL1Q12794 435 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 COASYQ13057 564 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 FAM178BQ8IXR5 827 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 THNSL1Q8IYQ7 743 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 AUTS2Q8WXX7 1259 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 KCNN1Q92952 543 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 P2RX5Q93086 422 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 PGBD4Q96DM1 585 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 C11orf84Q9BUA3 381 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-208ENST00000550283 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 TRIM6Q9C030 488 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-208ENST00000550283 GOLGA2P5Q9HBQ8 144 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 PANK4Q9NVE7 773 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 LARSQ9P2J5 1176 aaKnown RBP12.3□□□□□ -0.44
RAB5B-208ENST00000550283 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 ZMYM2Q9UBW7 1377 aa12.3□□□□□ -0.44
RAB5B-208ENST00000550283 HIDE1A8MVS5 230 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 NRP1O14786 923 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 FSCN2O14926 492 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 PRPF6O94906 941 aaKnown RBP12.29□□□□□ -0.44
RAB5B-208ENST00000550283 EFEMP2O95967 443 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 PIGRP01833 764 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 LAG3P18627 525 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 ADSSP30520 456 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 GRM5P41594 1212 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 NUCB2P80303 420 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 SPAG1Q07617 926 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 MCL1Q07820 350 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 NCBP1Q09161 790 aaKnown RBP12.29□□□□□ -0.44
RAB5B-208ENST00000550283 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 VN1R2Q8NFZ6 395 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 PAGE5Q96GU1 130 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 B3GALT6Q96L58 329 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 TNMDQ9H2S6 317 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 GIT1Q9Y2X7 761 aa12.29□□□□□ -0.44
RAB5B-208ENST00000550283 PRG3Q9Y2Y8 225 aaPredicted RBP12.29□□□□□ -0.44
RAB5B-208ENST00000550283 CASTOR2A6NHX0 329 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 PER2O15055 1255 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 TOM1L1O75674 476 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 SLFN14P0C7P3 912 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 MCF2P10911 925 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 SMTNP53814 917 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 ASIC1P78348 528 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 PLCB3Q01970 1234 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 RNASELQ05823 741 aaKnown RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 DLX2Q07687 328 aaPredicted RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 DCAF4L1Q3SXM0 396 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 XKR4Q5GH76 650 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 HERC4Q5GLZ8 1057 aaPredicted RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 CNNM4Q6P4Q7 775 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 CNNM3Q8NE01 707 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 C18orf25Q96B23 403 aaPredicted RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 IGSF21Q96ID5 467 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 SNX27Q96L92 541 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 PPP1R10Q96QC0 940 aaKnown RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 MRPL9Q9BYD2 267 aaKnown RBP12.28□□□□□ -0.44
RAB5B-208ENST00000550283 ST6GALNAC4Q9H4F1 302 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 FAM13BQ9NYF5 915 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 SPG21Q9NZD8 308 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 PCDHB12Q9Y5F1 795 aa12.28□□□□□ -0.44
RAB5B-208ENST00000550283 A0A0B4J269 797 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 A0A1W2PQ27 194 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 A0A1W2PQ64 194 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 A0A1W2PQD8 194 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 GCNT3O95395 438 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 GLP2RO95838 553 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 CXCL8P10145 99 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 LTBRP36941 435 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 OR1G1P47890 313 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 GUCY2FP51841 1108 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 STRN3Q13033 797 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 PLPP4Q5VZY2 271 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 ZPBP2Q6X784 338 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 EPM2AIP1Q7L775 607 aaPredicted RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 RBM23Q86U06 439 aaKnown RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 C3orf58Q8NDZ4 430 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms