RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ADH1AP07327 375 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 MYBP10242 640 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 PLA2G5P39877 138 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 NPTX2P47972 431 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 DSG1Q02413 1049 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 DMP1Q13316 513 aaPredicted RBP17.98■□□□□ 0.47
VPS29-207ENST00000549970 TUSC3Q13454 348 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 HSP90AA2PQ14568 343 aaPredicted RBP17.98■□□□□ 0.47
VPS29-207ENST00000549970 DCAF4L1Q3SXM0 396 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 ATF7IP2Q5U623 682 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 KIAA0319Q5VV43 1072 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 TRIM67Q6ZTA4 783 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 DAW1Q8N136 415 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 HASPINQ8TF76 798 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 PLIN2Q99541 437 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 PAAF1Q9BRP4 392 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 PHLPP2Q6ZVD8 1323 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 PLXNA3P51805 1871 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 WDFY4Q6ZS81 3184 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 TMEM221A6NGB7 291 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 M0R296 226 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 THP07101 528 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 PTPN21Q16825 1174 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 USP41Q3LFD5 358 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 C1orf186Q6ZWK4 172 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 CDK5RAP3Q96JB5 506 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 DRC1Q96MC2 740 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 PNMA5Q96PV4 448 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 KMT5AQ9NQR1 393 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 MAN1C1Q9NR34 630 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 CHST7Q9NS84 486 aa17.97■□□□□ 0.47
VPS29-207ENST00000549970 SFI1A8K8P3 1242 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 GLUD1P00367 558 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 RAD51AP2Q09MP3 1159 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 MAPK7Q13164 816 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 GLRA4Q5JXX5 417 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 HYIQ5T013 277 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 ARL6IP4Q66PJ3 421 aaKnown RBP17.96■□□□□ 0.47
VPS29-207ENST00000549970 GPR149Q86SP6 731 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 GLYCTKQ8IVS8 523 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 TDRD5Q8NAT2 981 aaKnown RBP17.96■□□□□ 0.47
VPS29-207ENST00000549970 RIN2Q8WYP3 895 aaPredicted RBP17.96■□□□□ 0.47
VPS29-207ENST00000549970 NT5C3AQ9H0P0 336 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 RXFP1Q9HBX9 757 aa17.96■□□□□ 0.47
VPS29-207ENST00000549970 ARIH1Q9Y4X5 557 aaPredicted RBP17.96■□□□□ 0.47
VPS29-207ENST00000549970 SF3B1O75533 1304 aaKnown RBP eCLIP17.96■□□□□ 0.46
VPS29-207ENST00000549970 MYO10Q9HD67 2058 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 C2orf16Q68DN1 1984 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 KIF4AO95239 1232 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 TAS1R3Q7RTX0 852 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 APBB1IPQ7Z5R6 666 aaPredicted RBP17.95■□□□□ 0.46
VPS29-207ENST00000549970 PALB2Q86YC2 1186 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 MFSD14AQ96MC6 490 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 MRPL4Q9BYD3 311 aaKnown RBP17.95■□□□□ 0.46
VPS29-207ENST00000549970 TMEM134Q9H6X4 195 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 ARHGAP28Q9P2N2 729 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 TNFSF13BQ9Y275 285 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 TRIP11Q15643 1979 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 DENND4AQ7Z401 1863 aa17.95■□□□□ 0.46
VPS29-207ENST00000549970 MYH11P35749 1972 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 SLC16A4O15374 487 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 SPATA31D3P0C874 917 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 RPL17P18621 184 aaKnown RBP17.94■□□□□ 0.46
VPS29-207ENST00000549970 GUCY2CP25092 1073 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 OSTNP61366 133 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 SIGLEC14Q08ET2 396 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 NAB2Q15742 525 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 ZNF568Q3ZCX4 644 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 RTP2Q5QGT7 225 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 PRSS55Q6UWB4 352 aaPredicted RBP17.94■□□□□ 0.46
VPS29-207ENST00000549970 SPATA31D4Q6ZUB0 917 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 CCDC149Q6ZUS6 474 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 CEP120Q8N960 986 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 SYT2Q8N9I0 419 aaPredicted RBP17.94■□□□□ 0.46
VPS29-207ENST00000549970 KREMEN2Q8NCW0 462 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 PBXIP1Q96AQ6 731 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 ACO2Q99798 780 aaKnown RBP17.94■□□□□ 0.46
VPS29-207ENST00000549970 TIPINQ9BVW5 301 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 TARS2Q9BW92 718 aaKnown RBP17.94■□□□□ 0.46
VPS29-207ENST00000549970 CDT1Q9H211 546 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 C17orf75Q9HAS0 396 aa17.94■□□□□ 0.46
VPS29-207ENST00000549970 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.94■□□□□ 0.46
VPS29-207ENST00000549970 VPS37CA5D8V6 355 aaPredicted RBP17.93■□□□□ 0.46
VPS29-207ENST00000549970 RFPL2O75678 378 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 ASGR2P07307 311 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 PLA2G4BP0C869 781 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 SLC12A3P55017 1021 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 TMEM119Q4V9L6 283 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 FAM171A1Q5VUB5 890 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 ELMSAN1Q6PJG2 1045 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 C15orf39Q6ZRI6 1047 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 BRAPQ7Z569 592 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 CEP57Q86XR8 500 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 USTQ9Y2C2 406 aa17.93■□□□□ 0.46
VPS29-207ENST00000549970 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
VPS29-207ENST00000549970 ZNF318Q5VUA4 2279 aa17.92■□□□□ 0.46
VPS29-207ENST00000549970 CCDC195A0A1B0GUA6 201 aa17.92■□□□□ 0.46
VPS29-207ENST00000549970 TGM5O43548 720 aa17.92■□□□□ 0.46
VPS29-207ENST00000549970 HARSP12081 509 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms