RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 PRSS50Q9UI38 385 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 CDY2AQ9Y6F7 541 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 SLC30A1Q9Y6M5 507 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 A0A0A6YYJ9 748 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 A6NNZ2 444 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 APAF1O14727 1248 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 MAFO75444 373 aaPredicted RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 LDHAP00338 332 aaKnown RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 CHGBP05060 677 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 ENO2P09104 434 aaPredicted RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 ACRV1P26436 265 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 GPR15P49685 360 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 FXR1P51114 621 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 FOXL1Q12952 345 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 PICALMQ13492 652 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 SPIDRQ14159 915 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 Q6ZPA2 131 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 SRGAP1Q7Z6B7 1085 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 REXO1L1PQ8IX06 675 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 ZBTB34Q8NCN2 500 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 OR14C36Q8NHC7 312 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 CALML6Q8TD86 181 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 ZNF483Q8TF39 744 aaPredicted RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 C1GALT1C1Q96EU7 318 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 MVB12AQ96EY5 273 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 ACO2Q99798 780 aaKnown RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 CARD11Q9BXL7 1154 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 C12orf65Q9H3J6 166 aaKnown RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 SLC39A2Q9NP94 309 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 INCENPQ9NQS7 918 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 GALNT8Q9NY28 637 aa5.31□□□□□ -1.56
SNRPF-202ENST00000549580 HECAQ9UBI9 543 aaPredicted RBP5.31□□□□□ -1.56
SNRPF-202ENST00000549580 H3BML4 177 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 OPHN1O60890 802 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 TUSC2O75896 110 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 ZBED1O96006 694 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 NBPF7P0C2Y1 421 aaPredicted RBP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 RHCEP18577 417 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 EDNRBP24530 442 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 ECE1P42892 770 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 HTR3AP46098 478 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 ZNF280AP59817 542 aaPredicted RBP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 RHDQ02161 417 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 MORC3Q14149 939 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 SAFBQ15424 915 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 ZNF568Q3ZCX4 644 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 LONRF3Q496Y0 759 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 CCDC178Q5BJE1 867 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 IL31Q6EBC2 164 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 LRSAM1Q6UWE0 723 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 OVCH2Q7RTZ1 564 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 C11orf96Q7Z7L8 435 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 PPM1NQ8N819 430 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 FATE1Q969F0 183 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 STRBPQ96SI9 672 aaKnown RBP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 BTBD2Q9BX70 525 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 ACE2Q9BYF1 805 aaPredicted RBP5.3□□□□□ -1.56
SNRPF-202ENST00000549580 TMEM60Q9H2L4 133 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 MTG2Q9H4K7 406 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 TLR9Q9NR96 1032 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 SCOCQ9UIL1 159 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 IPPQ9Y573 584 aa5.3□□□□□ -1.56
SNRPF-202ENST00000549580 HTRA2O43464 458 aaPredicted RBP5.29□□□□□ -1.56
SNRPF-202ENST00000549580 PCDH8O95206 1070 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 APEX1P27695 318 aaKnown RBP5.29□□□□□ -1.56
SNRPF-202ENST00000549580 HIBADHP31937 336 aaKnown RBP5.29□□□□□ -1.56
SNRPF-202ENST00000549580 MSX2P35548 267 aaPredicted RBP5.29□□□□□ -1.56
SNRPF-202ENST00000549580 NEK3P51956 506 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 SLC16A1P53985 500 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 CDK17Q00537 523 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 MALLQ13021 153 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 STILQ15468 1287 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 ADRM1Q16186 407 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 UAP1L1Q3KQV9 507 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 HAPLN2Q9GZV7 340 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 FAM204AQ9H8W3 233 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 CEP72Q9P209 647 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 LIMCH1Q9UPQ0 1083 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 REXO2Q9Y3B8 237 aaKnown RBP5.29□□□□□ -1.56
SNRPF-202ENST00000549580 NR2E1Q9Y466 385 aa5.29□□□□□ -1.56
SNRPF-202ENST00000549580 CCDC154A6NI56 674 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 TPP1O14773 563 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 MAFGO15525 162 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 IFIT2P09913 472 aaKnown RBP5.28□□□□□ -1.56
SNRPF-202ENST00000549580 MCAMP43121 646 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 PPARAQ07869 468 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 TOP3AQ13472 1001 aaPredicted RBP5.28□□□□□ -1.56
SNRPF-202ENST00000549580 PGS1Q32NB8 556 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 KANK2Q63ZY3 851 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 BTNL9Q6UXG8 535 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 GAREM2Q75VX8 874 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 BMP8AQ7Z5Y6 402 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 KIAA0319LQ8IZA0 1049 aa5.28□□□□□ -1.56
SNRPF-202ENST00000549580 SPICE1Q8N0Z3 855 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms