RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 SUMF1Q8NBK3 374 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 TCP11Q8WWU5 503 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 WASF1Q92558 559 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 CPB2Q96IY4 423 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 RPP25Q9BUL9 199 aaKnown RBP17.22■□□□□ 0.35
TCHP-208ENST00000549550 COLEC11Q9BWP8 271 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.22■□□□□ 0.35
TCHP-208ENST00000549550 FNIP2Q9P278 1114 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 VAV3Q9UKW4 847 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 PPME1Q9Y570 386 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 ASAP2O43150 1006 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
TCHP-208ENST00000549550 P4HBP07237 508 aaKnown RBP17.21■□□□□ 0.35
TCHP-208ENST00000549550 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
TCHP-208ENST00000549550 RPL17P18621 184 aaKnown RBP17.21■□□□□ 0.35
TCHP-208ENST00000549550 FSHRP23945 695 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 AXLP30530 894 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 GPC5P78333 572 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 USP41Q3LFD5 358 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.35
TCHP-208ENST00000549550 FUT10Q6P4F1 479 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 FGF14Q92915 247 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 CCDC51Q96ER9 411 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 SHDQ96IW2 340 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
TCHP-208ENST00000549550 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
TCHP-208ENST00000549550 NOTCH4Q99466 2003 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 SPTBN2O15020 2390 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 TPRP12270 2363 aaKnown RBP17.2■□□□□ 0.34
TCHP-208ENST00000549550 ZMYND10O75800 440 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
TCHP-208ENST00000549550 SNW1Q13573 536 aaKnown RBP17.2■□□□□ 0.34
TCHP-208ENST00000549550 NPY5RQ15761 445 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 INF2Q27J81 1249 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 RSPO4Q2I0M5 234 aaPredicted RBP17.2■□□□□ 0.34
TCHP-208ENST00000549550 PARM1Q6UWI2 310 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 GPR65Q8IYL9 337 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 DAGLBQ8NCG7 672 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 RABGGTAQ92696 567 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 LXNQ9BS40 222 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 NXF3Q9H4D5 531 aaKnown RBP17.2■□□□□ 0.34
TCHP-208ENST00000549550 ADAM28Q9UKQ2 775 aa17.2■□□□□ 0.34
TCHP-208ENST00000549550 INO80B-WBP1J3KQ70 363 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 MCM4P33991 863 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 PTENP60484 403 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 CREMQ03060 361 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 PCBP1Q15365 356 aaKnown RBP eCLIP17.19■□□□□ 0.34
TCHP-208ENST00000549550 XKR9Q5GH70 373 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 PRSS55Q6UWB4 352 aaPredicted RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 GRASPQ7Z6J2 395 aaPredicted RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 C4orf19Q8IY42 314 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 GSTCDQ8NEC7 633 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 FAM20AQ96MK3 541 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 MTRQ99707 1265 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 ZSCAN16Q9H4T2 348 aaPredicted RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 KCNMB3Q9NPA1 279 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 SPATA6Q9NWH7 488 aaPredicted RBP17.19■□□□□ 0.34
TCHP-208ENST00000549550 CDH7Q9ULB5 785 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
TCHP-208ENST00000549550 KANSL1LA0AUZ9 987 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 ZBTB39O15060 712 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 DEXIO95424 95 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 AKAP5P24588 427 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 NTHL1P78549 312 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 MXD4Q14582 209 aaPredicted RBP17.18■□□□□ 0.34
TCHP-208ENST00000549550 ZNF528Q3MIS6 628 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 RTP2Q5QGT7 225 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 OTUD6AQ7L8S5 288 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 KRT25Q7Z3Z0 450 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
TCHP-208ENST00000549550 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 BCO2Q9BYV7 579 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 RGL1Q9NZL6 768 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 NCDNQ9UBB6 729 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 CACNG4Q9UBN1 327 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 FBXW11Q9UKB1 542 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 ZDHHC9Q9Y397 364 aa17.18■□□□□ 0.34
TCHP-208ENST00000549550 ACACBO00763 2458 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 LAMTOR5O43504 91 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 TADA2AO75478 443 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 CTDNEP1O95476 244 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 F13A1P00488 732 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 ARF4P18085 180 aaPredicted RBP17.17■□□□□ 0.34
TCHP-208ENST00000549550 MBTD1Q05BQ5 628 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 GRIK3Q13003 919 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 UBXN2BQ14CS0 331 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 EPHA7Q15375 998 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 MLF2Q15773 248 aaPredicted RBP17.17■□□□□ 0.34
TCHP-208ENST00000549550 AMHR2Q16671 573 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 VARS2Q5ST30 1063 aaKnown RBP17.17■□□□□ 0.34
TCHP-208ENST00000549550 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
TCHP-208ENST00000549550 FGF13Q92913 245 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms