RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LACTBP83111 547 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-228ENST00000548938 SATB1Q01826 763 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 SNX1Q13596 522 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ANKRD20A2Q5SQ80 823 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ANKRD20A1Q5TYW2 823 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ANKRD20A3Q5VUR7 823 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ZNF720Q7Z2F6 126 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 FAM178BQ8IXR5 827 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 KCNV2Q8TDN2 545 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 CNKSR1Q969H4 720 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 PDGFDQ9GZP0 370 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-228ENST00000548938 TMX4Q9H1E5 349 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ACP6Q9NPH0 428 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■■■■ 56.5
HDAC7-228ENST00000548938 PPP1R12AO14974 1030 aaPredicted RBP14.7□□□□□ -0.06
HDAC7-228ENST00000548938 CLDN3O15551 220 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 BCRP11274 1271 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ATP2A2P16615 1042 aaKnown RBP14.7□□□□□ -0.06
HDAC7-228ENST00000548938 GCKP35557 465 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 TCEAL1Q15170 157 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 CYP4X1Q8N118 509 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 MICAL1Q8TDZ2 1067 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 DYDC2Q96IM9 177 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 ASIC3Q9UHC3 531 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 SMNDC1O75940 238 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■■□□□ 12.6
HDAC7-228ENST00000548938 KYNUQ16719 465 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 SLFN13Q68D06 897 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 STYK1Q6J9G0 422 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 RHBDF2Q6PJF5 856 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 ECHDC2Q86YB7 292 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 C12orf50Q8NA57 414 aaPredicted RBP14.69□□□□□ -0.06
HDAC7-228ENST00000548938 ZNF564Q8TBZ8 553 aaPredicted RBP14.69□□□□□ -0.06
HDAC7-228ENST00000548938 PWWP2AQ96N64 755 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 HSD17B14Q9BPX1 270 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 NUP85Q9BW27 656 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 TBK1Q9UHD2 729 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 EMSYQ7Z589 1322 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 SGPL1O95470 568 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 CETPP11597 493 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
HDAC7-228ENST00000548938 CHRNB2P17787 502 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 ATP5DP30049 168 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 STX2P32856 288 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 ATP11AP98196 1134 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 TRIP13Q15645 432 aaPredicted RBP14.69□□□□□ -0.06
HDAC7-228ENST00000548938 NSMFQ6X4W1 530 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 NOP9Q86U38 636 aaKnown RBP14.69□□□□□ -0.06
HDAC7-228ENST00000548938 ATG4AQ8WYN0 398 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 UTP4Q969X6 686 aaKnown RBP14.69□□□□□ -0.06
HDAC7-228ENST00000548938 STK24Q9Y6E0 443 aa14.69□□□□□ -0.06
HDAC7-228ENST00000548938 TISP43B9A030 160 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 SLITRK3O94933 977 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 TTC4O95801 387 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 CCNB1P14635 433 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 RFX1P22670 979 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 ZNF76P36508 570 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 GRIK3Q13003 919 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 ODR4Q5SWX8 454 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 MAEAQ7L5Y9 396 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 FAM167BQ9BTA0 163 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 AMNQ9BXJ7 453 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 LRRC19Q9H756 370 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 WHRNQ9P202 907 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
HDAC7-228ENST00000548938 EIF4E1BA6NMX2 242 aaKnown RBP14.68□□□□□ -0.06
HDAC7-228ENST00000548938 TULP1O00294 542 aaPredicted RBP14.68□□□□□ -0.06
HDAC7-228ENST00000548938 MTA2O94776 668 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 CIITAP33076 1130 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 ABL2P42684 1182 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 PPP3CAQ08209 521 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 SGO2Q562F6 1265 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 CAPRIN2Q6IMN6 1127 aaKnown RBP14.68□□□□□ -0.06
HDAC7-228ENST00000548938 FAM47EQ6ZV65 393 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 SRRM1Q8IYB3 904 aaKnown RBP14.68□□□□□ -0.06
HDAC7-228ENST00000548938 EPS8L1Q8TE68 723 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 PCIF1Q9H4Z3 704 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 ETNK1Q9HBU6 452 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 CHST7Q9NS84 486 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 KLHL14Q9P2G3 628 aa14.68□□□□□ -0.06
HDAC7-228ENST00000548938 GREB1LQ9C091 1923 aaPredicted RBP14.68□□□□□ -0.06
HDAC7-228ENST00000548938 THAP12O43422 761 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 UNC5CO95185 931 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 PEX19P40855 299 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 GCLMP48507 274 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 RWDD2BP57060 319 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 CDCA2Q69YH5 1023 aaPredicted RBP14.67□□□□□ -0.06
HDAC7-228ENST00000548938 DEFB132Q7Z7B7 95 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 SYCP3Q8IZU3 236 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 DBNDD1Q9H9R9 158 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 KCNQ5Q9NR82 932 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 NOCTQ9UK39 431 aaKnown RBP14.67□□□□□ -0.06
HDAC7-228ENST00000548938 SUGT1Q9Y2Z0 365 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 UBE4BO95155 1302 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 FOXN2P32314 431 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 VPS41P49754 854 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 ITGA8P53708 1063 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 NFIAQ12857 509 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 MTFR1Q15390 333 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms