RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CXCL14O95715 111 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 GLP2RO95838 553 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 IL9P15248 144 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX54-205ENST00000548786 DSC1Q08554 894 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 GRIK3Q13003 919 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 ADAM15Q13444 863 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 COL19A1Q14993 1142 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 DUSP6Q16828 381 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 CTC1Q2NKJ3 1217 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 SEZ6Q53EL9 994 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 HAUS6Q7Z4H7 955 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 DDX53Q86TM3 631 aaKnown RBP17.31■□□□□ 0.36
DDX54-205ENST00000548786 EFHBQ8N7U6 833 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 VN1R2Q8NFZ6 395 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 HASPINQ8TF76 798 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 PAAF1Q9BRP4 392 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 ZBP1Q9H171 429 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
DDX54-205ENST00000548786 BDP1A6H8Y1 2624 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 C2orf71A6NGG8 1288 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 MYMKA6NI61 221 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 NCK2O43639 380 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 NMT1P30419 496 aaKnown RBP17.3■□□□□ 0.36
DDX54-205ENST00000548786 ME1P48163 572 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 NCKAP1LP55160 1127 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 PDE12Q6L8Q7 609 aaKnown RBP17.3■□□□□ 0.36
DDX54-205ENST00000548786 MPZL3Q6UWV2 235 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 CCDC73Q6ZRK6 1079 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 SV2BQ7L1I2 683 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 TAS1R1Q7RTX1 841 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 APBB1IPQ7Z5R6 666 aaPredicted RBP17.3■□□□□ 0.36
DDX54-205ENST00000548786 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 TMEM87AQ8NBN3 555 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 STAMQ92783 540 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 B3GALT6Q96L58 329 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 NTPCRQ9BSD7 190 aaKnown RBP17.3■□□□□ 0.36
DDX54-205ENST00000548786 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 PTPRHQ9HD43 1115 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 TBC1D7Q9P0N9 293 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 C5orf42Q9H799 3197 aa17.3■□□□□ 0.36
DDX54-205ENST00000548786 TRAK2O60296 914 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 CUTAO60888 179 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 PPP6R2O75170 966 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 NR1I2O75469 434 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 ZNF131P52739 623 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 ZC2HC1CQ53FD0 456 aaPredicted RBP17.29■□□□□ 0.36
DDX54-205ENST00000548786 SFR1Q86XK3 245 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 MRPL43Q8N983 215 aaKnown RBP17.29■□□□□ 0.36
DDX54-205ENST00000548786 DDX12PQ92771 950 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 DHX58Q96C10 678 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 CCDC94Q9BW85 323 aaPredicted RBP17.29■□□□□ 0.36
DDX54-205ENST00000548786 CLEC1BQ9P126 229 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 ZDHHC9Q9Y397 364 aa17.29■□□□□ 0.36
DDX54-205ENST00000548786 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
DDX54-205ENST00000548786 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.28■□□□□ 0.36
DDX54-205ENST00000548786 ABLIM1O14639 778 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
DDX54-205ENST00000548786 THP07101 528 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 CTSAP10619 480 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 MCF2P10911 925 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
DDX54-205ENST00000548786 IDEP14735 1019 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 PROZP22891 400 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 GRM5P41594 1212 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 LIG4P49917 911 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 YARSP54577 528 aaKnown RBP17.28■□□□□ 0.36
DDX54-205ENST00000548786 BMS1Q14692 1282 aaKnown RBP17.28■□□□□ 0.36
DDX54-205ENST00000548786 NOLC1Q14978 699 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX54-205ENST00000548786 SHC4Q6S5L8 630 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 KCNG4Q8TDN1 519 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 GOLGA2P5Q9HBQ8 144 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 CD207Q9UJ71 328 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 TBX20Q9UMR3 447 aa17.28■□□□□ 0.36
DDX54-205ENST00000548786 CARNS1A5YM72 827 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 GRXCR2A6NFK2 248 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 H0YCG3 227 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 CLASP2O75122 1294 aaKnown RBP17.27■□□□□ 0.36
DDX54-205ENST00000548786 TOM1L1O75674 476 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 KIF4AO95239 1232 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 BRD1O95696 1058 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 TUSC3Q13454 348 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 BECN1Q14457 450 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.36
DDX54-205ENST00000548786 PTPN14Q15678 1187 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
DDX54-205ENST00000548786 CDCA3Q99618 268 aaPredicted RBP17.27■□□□□ 0.36
DDX54-205ENST00000548786 COLEC11Q9BWP8 271 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 HAPLN2Q9GZV7 340 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 IKZF4Q9H2S9 585 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 PCDHA7Q9UN72 937 aa17.27■□□□□ 0.36
DDX54-205ENST00000548786 ZMYM2Q9UBW7 1377 aa17.27■□□□□ 0.35
DDX54-205ENST00000548786 TISP43B9A030 160 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 CLDN3O15551 220 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 TADA2AO75478 443 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 SOD2P04179 222 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 URODP06132 367 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 MYBP10242 640 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms