RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 LANCL2Q9NS86 450 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 TDP1Q9NUW8 608 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 STXBP5LQ9Y2K9 1186 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 A0A088AWK7 358 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 NRP1O14786 923 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 NUAK1O60285 661 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 ALOX15P16050 662 aaPredicted RBP5.21□□□□□ -1.58
PTCH1-216ENST00000548379 PCSK1P29120 753 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 NKX6-1P78426 367 aaPredicted RBP5.21□□□□□ -1.58
PTCH1-216ENST00000548379 TLE1Q04724 770 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 KIAA2012Q0VF49 1180 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 NOGQ13253 232 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 ACAP1Q15027 740 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 ANO6Q4KMQ2 910 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 NPNTQ6UXI9 565 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 KSR2Q6VAB6 950 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 C1QL4Q86Z23 238 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 CMTM4Q8IZR5 234 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 ANKRD53Q8N9V6 530 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 FAM156AQ8NDB6 213 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 PLBD2Q8NHP8 589 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 CLPTM1LQ96KA5 538 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 B3GNT5Q9BYG0 378 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 KCNH6Q9H252 994 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 POLHQ9Y253 713 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 NR2E3Q9Y5X4 410 aa5.21□□□□□ -1.58
PTCH1-216ENST00000548379 CFTRP13569 1480 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 LRRC14BA6NHZ5 514 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 APAF1O14727 1248 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 SLC26A4O43511 780 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 PLIN1O60240 522 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 FTLP02792 175 aaPredicted RBP5.2□□□□□ -1.58
PTCH1-216ENST00000548379 RHBDL3P58872 404 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 CTXN1P60606 82 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 FAM193AP78312 1265 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 DUSP2Q05923 314 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 DUSP8Q13202 625 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 SP140Q13342 867 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 SEMA5AQ13591 1074 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 SAFBQ15424 915 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTCH1-216ENST00000548379 PRAMEF14Q5SWL7 426 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 CIAPIN1Q6FI81 312 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 SWSAP1Q6NVH7 229 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 C3orf20Q8ND61 904 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 REPS2Q8NFH8 660 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 KLHDC4Q8TBB5 520 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 BORCS6Q96GS4 357 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 CDK5RAP3Q96JB5 506 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 FAM167AQ96KS9 214 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 SEC61A2Q9H9S3 476 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 NR2E1Q9Y466 385 aa5.2□□□□□ -1.58
PTCH1-216ENST00000548379 MYBBP1AQ9BQG0 1328 aaKnown RBP5.2□□□□□ -1.58
PTCH1-216ENST00000548379 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 NT5C1B-RDH14C9J2C7 533 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 B4GALT4O60513 344 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 GPR32O75388 356 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 ARIH2O95376 493 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 C8AP07357 584 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 SLC5A1P13866 664 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 IL2RBP14784 551 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 SYN1P17600 705 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 DDCP20711 480 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 CASRP41180 1078 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 KCNC1P48547 511 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 EPHB4P54760 987 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 RAB1AP62820 205 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 MRPL49Q13405 166 aaKnown RBP5.19□□□□□ -1.58
PTCH1-216ENST00000548379 SNAPC2Q13487 334 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 LLGL1Q15334 1064 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 ZNF124Q15973 351 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 KHDC1Q4VXA5 237 aaKnown RBP5.19□□□□□ -1.58
PTCH1-216ENST00000548379 COBLL1Q53SF7 1204 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 FAM47AQ5JRC9 791 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 FAM124AQ86V42 546 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 CCHCR1Q8TD31 782 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 RAB24Q969Q5 203 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 RPL10LQ96L21 214 aaKnown RBP5.19□□□□□ -1.58
PTCH1-216ENST00000548379 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 LDAHQ9H6V9 325 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 AGO3Q9H9G7 860 aaKnown RBP5.19□□□□□ -1.58
PTCH1-216ENST00000548379 IL23AQ9NPF7 189 aa5.19□□□□□ -1.58
PTCH1-216ENST00000548379 AJAP1Q9UKB5 411 aaPredicted RBP5.19□□□□□ -1.58
PTCH1-216ENST00000548379 CAPN8A6NHC0 703 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 FRS3O43559 492 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 FTH1P19P0C7X4 201 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 TYRP14679 529 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 MALP21145 153 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 FPR1P21462 350 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 CFPP27918 469 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 FLT3LGP49771 235 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 PER3P56645 1201 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 GJA9P57773 515 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 GPSM2P81274 684 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 RIN1Q13671 783 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 PKN1Q16512 942 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 MFSD14BQ5SR56 506 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 SYCP2LQ5T4T6 812 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 OTUD7BQ6GQQ9 843 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 BORAQ6PGQ7 559 aa5.18□□□□□ -1.58
PTCH1-216ENST00000548379 MAEAQ7L5Y9 396 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms