RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 CARNS1A5YM72 827 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 ARL5CA6NH57 179 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 KIAA0391O15091 583 aaKnown RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 FAM189A1O60320 539 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 MBD3O95983 291 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 HARSP12081 509 aaKnown RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 HOXD13P35453 343 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 YARSP54577 528 aaKnown RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 ZNF658Q5TYW1 1059 aaPredicted RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 HS2ST1Q7LGA3 356 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 THNSL1Q8IYQ7 743 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 CEP120Q8N960 986 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 POMGNT1Q8WZA1 660 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 ACAP3Q96P50 834 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 TGS1Q96RS0 853 aaKnown RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 RPS6KC1Q96S38 1066 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 GAD1Q99259 594 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 CLSTN2Q9H4D0 955 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 AGO2Q9UKV8 859 aaKnown RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 INPP5FQ9Y2H2 1132 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 GDAQ9Y2T3 454 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 MRPL42Q9Y6G3 142 aaKnown RBP12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 CDH23Q9H251 3354 aa12.42□□□□□ -0.42
CALCOCO1-208ENST00000547988 TRANK1O15050 2925 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 TISP43B9A030 160 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 TGFB1I1O43294 461 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 ARHGEF15O94989 841 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 CLTAP09496 248 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 LAG3P18627 525 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 ADSSP30520 456 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 MCM4P33991 863 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 OSTNP61366 133 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 ERVK-21P61565 698 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 RNASELQ05823 741 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 COBLL1Q53SF7 1204 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 ARMCX5Q6P1M9 558 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 LRRC55Q6ZSA7 311 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 GOLGA5Q8TBA6 731 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 GPT2Q8TD30 523 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 PLVAPQ9BX97 442 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 NUP62CLQ9H1M0 184 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 IKZF4Q9H2S9 585 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 CWH43Q9H720 699 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 PLEKHA5Q9HAU0 1116 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 TYW1Q9NV66 732 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
CALCOCO1-208ENST00000547988 SZT2Q5T011 3432 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 SCN1AP35498 2009 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 C5orf67F2Z3F1 127 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 POMCP01189 267 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 PTMSP20962 102 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 PPP1R2P41236 205 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 SCNN1GP51170 649 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 CAMK4Q16566 473 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 XKR4Q5GH76 650 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 ALKAL1Q6UXT8 129 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 C12orf56Q8IXR9 622 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 TMEM192Q8IY95 271 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 TRIML1Q8N9V2 468 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 GSTCDQ8NEC7 633 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 TMEM174Q8WUU8 243 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 SNX27Q96L92 541 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 TSPAN18Q96SJ8 248 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 KCTD10Q9H3F6 313 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 AGPAT3Q9NRZ7 376 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 CNTN3Q9P232 1028 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 KIAA1468Q9P260 1216 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 MAN1B1Q9UKM7 699 aa12.4□□□□□ -0.42
CALCOCO1-208ENST00000547988 PDXKO00764 312 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 PTGESO14684 152 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 RB1P06400 928 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 THP07101 528 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 CXCL8P10145 99 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 KCNE1P15382 129 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 CTNNB1P35222 781 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 BMPR1AP36894 532 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 TNFSF9P41273 254 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 ACOT2P49753 483 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 PPP2R3AQ06190 1150 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 DSC1Q08554 894 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 STIM1Q13586 685 aa12.39□□□□□ -0.43
CALCOCO1-208ENST00000547988 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms