RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 GCOM2Q9BZD3 368 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-215ENST00000547672 L2HGDHQ9H9P8 463 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 C1orf112Q9NSG2 853 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 ANKFY1Q9P2R3 1169 aa14.53□□□□□ -0.08
PTCH1-215ENST00000547672 SMIM35A0A1B0GVV1 85 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 ANO9A1A5B4 782 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 PHACTR2O75167 634 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 IGHA2P01877 340 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 ZNF286BP0CG31 522 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 TBXAS1P24557 533 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-215ENST00000547672 ARHGAP25P42331 645 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 CLCN3P51790 818 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 LACTBP83111 547 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-215ENST00000547672 GCNT1Q02742 428 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 DUOXA2Q1HG44 320 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 C1orf220Q5T0J3 134 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 GJC2Q5T442 439 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-215ENST00000547672 PPP1R2P3Q6NXS1 205 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 BRSK2Q8IWQ3 736 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 NLRP7Q8WX94 980 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 FAXDC2Q96IV6 333 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 NOX5Q96PH1 765 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 CFHR5Q9BXR6 569 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 TSKSQ9UJT2 592 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 REXO2Q9Y3B8 237 aaKnown RBP14.52□□□□□ -0.09
PTCH1-215ENST00000547672 KAT6AQ92794 2004 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 SIP14410 1827 aa14.52□□□□□ -0.09
PTCH1-215ENST00000547672 UQCRHLA0A096LP55 91 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 TULP1O00294 542 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-215ENST00000547672 ERLIN2O94905 339 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 UQCRHP07919 91 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 CLTAP09496 248 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 PROZP22891 400 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 AXLP30530 894 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 CYP2C19P33261 490 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 ACOT2P49753 483 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 PSEN2P49810 448 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 CYP27A1Q02318 531 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 SP3Q02447 781 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 PTK2Q05397 1052 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 MBTD1Q05BQ5 628 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 DRP2Q13474 957 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 BIRC3Q13489 604 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 MFSD10Q14728 455 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 FSCN1Q16658 493 aaKnown RBP14.51□□□□□ -0.09
PTCH1-215ENST00000547672 ZACNQ401N2 412 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 TMEM63BQ5T3F8 832 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 PHLDB3Q6NSJ2 640 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 NFRKBQ6P4R8 1299 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 CD302Q8IX05 232 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 MNS1Q8NEH6 495 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 TRAPPC12Q8WVT3 735 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 ERO1AQ96HE7 468 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 TSPAN18Q96SJ8 248 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 RPF1Q9H9Y2 349 aaKnown RBP14.51□□□□□ -0.09
PTCH1-215ENST00000547672 ADAMTS1Q9UHI8 967 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 JRKLQ9Y4A0 524 aa14.51□□□□□ -0.09
PTCH1-215ENST00000547672 CNTNAP2Q9UHC6 1331 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 EVI5O60447 810 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 TNNC2P02585 160 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 C4BPAP04003 597 aaKnown RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 PLEKP08567 350 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 MYL3P08590 195 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 H2AFZP0C0S5 128 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 SMIM10L2AP0DMW4 78 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 SMIM10L2BP0DMW5 78 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 MAP2K2P36507 400 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 NLRP11P59045 1033 aaKnown RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 YWHAEP62258 255 aaKnown RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 GFPT1Q06210 699 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 ARHGAP44Q17R89 818 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 KIAA0753Q2KHM9 967 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 SGSM1Q2NKQ1 1148 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 DCAF4L1Q3SXM0 396 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 ZNF568Q3ZCX4 644 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 PRAMEF19Q5SWL8 479 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 ALKBH5Q6P6C2 394 aaKnown RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 CRELD2Q6UXH1 353 aaPredicted RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 C15orf39Q6ZRI6 1047 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 H2AFVQ71UI9 128 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 NT5DC4Q86YG4 428 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 KIAA0319LQ8IZA0 1049 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 PPM1KQ8N3J5 372 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 CEP112Q8N8E3 955 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 TAF4BQ92750 862 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 PTPRHQ9HD43 1115 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 FLRT1Q9NZU1 646 aa14.5□□□□□ -0.09
PTCH1-215ENST00000547672 CPSF3Q9UKF6 684 aaKnown RBP14.5□□□□□ -0.09
PTCH1-215ENST00000547672 A0A087WZ62 844 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 A0A0A6YYK5 440 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 MBLAC1A4D2B0 266 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 HAS3O00219 553 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 FOXN3O00409 490 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 B4GALT4O60513 344 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 RARBP10826 455 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 PRLRP16471 622 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 PIK3CAP42336 1068 aa14.49□□□□□ -0.09
PTCH1-215ENST00000547672 NAP1L1P55209 391 aaKnown RBP14.49□□□□□ -0.09
PTCH1-215ENST00000547672 GJA9P57773 515 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms