RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 GRM5P41594 1212 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 LIG4P49917 911 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 DSC1Q08554 894 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 NOLC1Q14978 699 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 E2F4Q16254 413 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 PDE12Q6L8Q7 609 aaKnown RBP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 ZPBP2Q6X784 338 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 TMC7Q7Z402 723 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 VPS52Q8N1B4 723 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 STAMQ92783 540 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 ZBTB45Q96K62 511 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 SPATA32Q96LK8 384 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 FIZ1Q96SL8 496 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-204ENST00000547517 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 TLE6Q9H808 572 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 MARCH5Q9NX47 278 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 CACNG4Q9UBN1 327 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
RAB5C-204ENST00000547517 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.95□□□□□ -0.34
RAB5C-204ENST00000547517 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 F8W810 466 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
RAB5C-204ENST00000547517 PER2O15055 1255 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 TBX10O75333 385 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 NR1I2O75469 434 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 ALDH2P05091 517 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 IDEP14735 1019 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
RAB5C-204ENST00000547517 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 DDX53Q86TM3 631 aaKnown RBP12.95□□□□□ -0.34
RAB5C-204ENST00000547517 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
RAB5C-204ENST00000547517 AUTS2Q8WXX7 1259 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 RABGGTAQ92696 567 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 DNAJC19Q96DA6 116 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 VN1R3Q9BXE9 311 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 CUEDC2Q9H467 287 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
RAB5C-204ENST00000547517 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 RCOR1Q9UKL0 485 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 TBX20Q9UMR3 447 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 ATP6V1DQ9Y5K8 247 aa12.95□□□□□ -0.34
RAB5C-204ENST00000547517 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-204ENST00000547517 POLR2DO15514 142 aaKnown RBP12.94□□□□□ -0.34
RAB5C-204ENST00000547517 CLDN3O15551 220 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 NCK2O43639 380 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 THP07101 528 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 GAP43P17677 238 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 SCP2P22307 547 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 NDUFV1P49821 464 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 MCL1Q07820 350 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 TUSC3Q13454 348 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
RAB5C-204ENST00000547517 COL19A1Q14993 1142 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 CLUL1Q15846 466 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 DUSP6Q16828 381 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-204ENST00000547517 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 IQUBQ8NA54 791 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 KCNN1Q92952 543 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 SNX27Q96L92 541 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 MRPL44Q9H9J2 332 aaKnown RBP12.94□□□□□ -0.34
RAB5C-204ENST00000547517 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-204ENST00000547517 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
RAB5C-204ENST00000547517 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 C2orf71A6NGG8 1288 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 GCNT3O95395 438 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 GLP2RO95838 553 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 PIGRP01833 764 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 CTSAP10619 480 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 ABCD1P33897 745 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 ASIC1P78348 528 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 RBM10P98175 930 aaKnown RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 GTF2BQ00403 316 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 LEXMQ3ZCV2 418 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 TPRNQ4KMQ1 711 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 HERC4Q5GLZ8 1057 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 LLGL2Q6P1M3 1020 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 EFHBQ8N7U6 833 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 MRPL43Q8N983 215 aaKnown RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 ADAMTS19Q8TE59 1207 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 HASPINQ8TF76 798 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 ACAP3Q96P50 834 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 CDCA3Q99618 268 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-204ENST00000547517 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 HERC2P3Q9BVR0 1158 aa12.93□□□□□ -0.34
RAB5C-204ENST00000547517 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms