RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 RNF19AQ9NV58 838 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 MAN1B1Q9UKM7 699 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 INPP5FQ9Y2H2 1132 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 YBX2Q9Y2T7 364 aaKnown RBP15.02■□□□□ -0
PTCH1-213ENST00000546820 TMEM265A0A087WTH1 108 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 ARL5CA6NH57 179 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 MEIS3P2A8K0S8 358 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 RECQL4O94761 1208 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 ADSSP30520 456 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 HOXD13P35453 343 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 MLH1P40692 756 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 COBLL1Q53SF7 1204 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 PPP2R2DQ66LE6 453 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 ISM2Q6H9L7 571 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 GPR153Q6NV75 609 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 LRRC43Q8N309 656 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 SYAP1Q96A49 352 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-213ENST00000546820 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
PTCH1-213ENST00000546820 TSPAN18Q96SJ8 248 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 GAD1Q99259 594 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 TYW1Q9NV66 732 aaKnown RBP15.01□□□□□ -0.01
PTCH1-213ENST00000546820 KLK14Q9P0G3 267 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 MAPK8IP1Q9UQF2 711 aa15.01□□□□□ -0.01
PTCH1-213ENST00000546820 LINC01553A4QN01 128 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 BIN1O00499 593 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 INPPL1O15357 1258 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 TGFB1I1O43294 461 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 EXTL3O43909 919 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 THP07101 528 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 GATMP50440 423 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 MORC3Q14149 939 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 SKOR2Q2VWA4 1001 aaPredicted RBP15□□□□□ -0.01
PTCH1-213ENST00000546820 CD302Q8IX05 232 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 CEP120Q8N960 986 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 HAPLN2Q9GZV7 340 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 IKZF4Q9H2S9 585 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 PCIF1Q9H4Z3 704 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 RC3H2Q9HBD1 1191 aaKnown RBP15□□□□□ -0.01
PTCH1-213ENST00000546820 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 CPSF3Q9UKF6 684 aaKnown RBP15□□□□□ -0.01
PTCH1-213ENST00000546820 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 PTPRSQ13332 1948 aa15□□□□□ -0.01
PTCH1-213ENST00000546820 LCHNA4D1U4 455 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 ZNF233A6NK53 670 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 TISP43B9A030 160 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 PSMA7O14818 248 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 CLIC2O15247 247 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 POMCP01189 267 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 ALDH2P05091 517 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 RB1P06400 928 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 LAG3P18627 525 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 RPL13P26373 211 aaKnown RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 PRCPP42785 496 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 ALDH7A1P49419 539 aaKnown RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 ACOT2P49753 483 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 TAP1Q03518 808 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 MYBPC2Q14324 1141 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 SEZ6Q53EL9 994 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 ALKAL1Q6UXT8 129 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 C12orf56Q8IXR9 622 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 GPD1LQ8N335 351 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 XXYLT1Q8NBI6 393 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 NOC3LQ8WTT2 800 aaKnown RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 CLP1Q92989 425 aaKnown RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 DHTKD1Q96HY7 919 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 ZFP42Q96MM3 310 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 TSG101Q99816 390 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 CBWD1Q9BRT8 395 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 FAM213AQ9BRX8 229 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 KCTD10Q9H3F6 313 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 SLC38A7Q9NVC3 462 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 TBC1D13Q9NVG8 400 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 TRAF3IP3Q9Y228 551 aa14.99□□□□□ -0.01
PTCH1-213ENST00000546820 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 MRPL42Q9Y6G3 142 aaKnown RBP14.99□□□□□ -0.01
PTCH1-213ENST00000546820 TRIOBPQ9H2D6 2365 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 IL18RAPO95256 599 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 BMPR1AP36894 532 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SCNN1GP51170 649 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 ERVK-21P61565 698 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 GRIK3Q13003 919 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SURF1Q15526 300 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SLC10A6Q3KNW5 377 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 XKR4Q5GH76 650 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 ZNF697Q5TEC3 545 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 LRRC55Q6ZSA7 311 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SLC9A9Q8IVB4 645 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 TMEM192Q8IY95 271 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SMYD4Q8IYR2 804 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-213ENST00000546820 ADSSL1Q8N142 457 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 TMEM174Q8WUU8 243 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SAAL1Q96ER3 474 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 LRCH3Q96II8 777 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 SNX27Q96L92 541 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 ZNF576Q9H609 170 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 ASB7Q9H672 318 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms