RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 TGM5O43548 720 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 RECQL4O94761 1208 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 KIF4AO95239 1232 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 PRSS55Q6UWB4 352 aaPredicted RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 PALB2Q86YC2 1186 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 GLYCTKQ8IVS8 523 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 HASPINQ8TF76 798 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 RHOBTB2Q9BYZ6 727 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 SSX2IPQ9Y2D8 614 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 ARHGEF35A5YM69 484 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 ACKR2O00590 384 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 PRKCBP05771 671 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.89
CHERP-204ENST00000546538 NAMPTP43490 491 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 PRPF4BQ13523 1007 aaKnown RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 HSP90AA2PQ14568 343 aaPredicted RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 USP41Q3LFD5 358 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 NT5DC1Q5TFE4 455 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 CWF19L1Q69YN2 538 aaKnown RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 OTOP3Q7RTS5 596 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 ZBTB8OSQ8IWT0 167 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 HACE1Q8IYU2 909 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 RSAD2Q8WXG1 361 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 RIN2Q8WYP3 895 aaPredicted RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 MYADMQ96S97 322 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 BHMT2Q9H2M3 363 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 KCNK12Q9HB15 430 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 WDR6Q9NNW5 1121 aaKnown RBP20.61■□□□□ 0.89
CHERP-204ENST00000546538 PCDHB6Q9Y5E3 794 aa20.61■□□□□ 0.89
CHERP-204ENST00000546538 TRIP11Q15643 1979 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 SPDYE4A6NLX3 237 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 PP2D1A8MPX8 630 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 N4BP3O15049 544 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 NARSO43776 548 aaKnown RBP20.6■□□□□ 0.89
CHERP-204ENST00000546538 TRAPPC10P48553 1259 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 TUSC3Q13454 348 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 DAW1Q8N136 415 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 IGSF22Q8N9C0 903 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 ERMNQ8TAM6 284 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 PRRX2Q99811 253 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 C2orf40Q9H1Z8 148 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 FNIP2Q9P278 1114 aa20.6■□□□□ 0.89
CHERP-204ENST00000546538 WDR87Q6ZQQ6 2873 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 ADAM12O43184 909 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 NR1I2O75469 434 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 NPR3P17342 541 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 LIG1P18858 919 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 CCT6AP40227 531 aaKnown RBP20.59■□□□□ 0.89
CHERP-204ENST00000546538 HMGN5P82970 282 aaKnown RBP20.59■□□□□ 0.89
CHERP-204ENST00000546538 MAPK6Q16659 721 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 CD300LGQ6UXG3 332 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 GPR65Q8IYL9 337 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 ACSF2Q96CM8 615 aaPredicted RBP20.59■□□□□ 0.89
CHERP-204ENST00000546538 NT5C3AQ9H0P0 336 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 KIAA1024Q9UPX6 916 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 CLUHO75153 1309 aa20.59■□□□□ 0.89
CHERP-204ENST00000546538 H0Y858 1186 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 MUTP22033 750 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 PTGDRQ13258 359 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 TDGQ13569 410 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 TAS1R3Q7RTX0 852 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 KCNK18Q7Z418 384 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 LNX1Q8TBB1 728 aaPredicted RBP20.58■□□□□ 0.88
CHERP-204ENST00000546538 SMG7Q92540 1137 aaKnown RBP20.58■□□□□ 0.88
CHERP-204ENST00000546538 ZSCAN31Q96LW9 406 aaPredicted RBP20.58■□□□□ 0.88
CHERP-204ENST00000546538 CLSTN3Q9BQT9 956 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 MMTAG2Q9BU76 263 aaKnown RBP20.58■□□□□ 0.88
CHERP-204ENST00000546538 DDX19AQ9NUU7 478 aaKnown RBP20.58■□□□□ 0.88
CHERP-204ENST00000546538 LRWD1Q9UFC0 647 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 DUSP12Q9UNI6 340 aa20.58■□□□□ 0.88
CHERP-204ENST00000546538 GALR2O43603 387 aaPredicted RBP20.57■□□□□ 0.88
CHERP-204ENST00000546538 EIF5BO60841 1220 aaKnown RBP20.57■□□□□ 0.88
CHERP-204ENST00000546538 TADA2AO75478 443 aa20.57■□□□□ 0.88
CHERP-204ENST00000546538 CDC25AP30304 524 aa20.57■□□□□ 0.88
CHERP-204ENST00000546538 HAUS3Q68CZ6 603 aa20.57■□□□□ 0.88
CHERP-204ENST00000546538 DEPTORQ8TB45 409 aa20.57■□□□□ 0.88
CHERP-204ENST00000546538 HDAC7Q8WUI4 952 aa20.57■□□□□ 0.88
CHERP-204ENST00000546538 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
CHERP-204ENST00000546538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHERP-204ENST00000546538 GDAQ9Y2T3 454 aa20.57■□□□□ 0.88
CHERP-204ENST00000546538 SF3B1O75533 1304 aaKnown RBP eCLIP20.57■□□□□ 0.888e-6■■■■■ 107
CHERP-204ENST00000546538 E9PMD0 336 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 PI15O43692 258 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 C1RP00736 705 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 THP07101 528 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 MAPK7Q13164 816 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 GLRA4Q5JXX5 417 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 FAM171A1Q5VUB5 890 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 ASTLQ6HA08 431 aaPredicted RBP20.56■□□□□ 0.88
CHERP-204ENST00000546538 CEP120Q8N960 986 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 PIK3R5Q8WYR1 880 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 PPP1R10Q96QC0 940 aaKnown RBP20.56■□□□□ 0.88
CHERP-204ENST00000546538 RUSC1Q9BVN2 902 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 PLEKHA4Q9H4M7 779 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 EPS15L1Q9UBC2 864 aa20.56■□□□□ 0.88
CHERP-204ENST00000546538 MEFVO15553 781 aaPredicted RBP20.55■□□□□ 0.88
CHERP-204ENST00000546538 PDIA5Q14554 519 aa20.55■□□□□ 0.88
CHERP-204ENST00000546538 CYP26C1Q6V0L0 522 aa20.55■□□□□ 0.88
CHERP-204ENST00000546538 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms