RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 STBD1O95210 358 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 C22orf31O95567 290 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 GHRHP01286 108 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 GNAT1P11488 350 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 PLCG1P19174 1290 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 MPSTP25325 297 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 EIF1AXP47813 144 aaKnown RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 RARRES1P49788 294 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 CDK7P50613 346 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 ADAM17P78536 824 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TLE2Q04725 743 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 GRB10Q13322 594 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 ECM1Q16610 540 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 PTGISQ16647 500 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 ZNF484Q5JVG2 852 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 RESP18Q5W5W9 173 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 ALKBH2Q6NS38 261 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 SHC4Q6S5L8 630 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 USP49Q70CQ1 688 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 SERINC5Q86VE9 423 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 WFDC8Q8IUA0 241 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 FMR1NBQ8N0W7 255 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TMEM87AQ8NBN3 555 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 PIGOQ8TEQ8 1089 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 SLC7A3Q8WY07 619 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 CALML4Q96GE6 196 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 EPSTI1Q96J88 318 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 CEP170P1Q96L14 293 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TOX2Q96NM4 488 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 NSUN5Q96P11 429 aaKnown RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 CTAGE1Q96RT6 745 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 SH2D3AQ9BRG2 576 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TRPV6Q9H1D0 765 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 RBSNQ9H1K0 784 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 PDLIM7Q9NR12 457 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 CYP26B1Q9NR63 512 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 ABI2Q9NYB9 513 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TBX21Q9UL17 535 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 PCDHA7Q9UN72 937 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 PPME1Q9Y570 386 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 MICAL3Q7RTP6 2002 aa7.04□□□□□ -1.28
PRKDC-211ENST00000546304 TRIOBPQ9H2D6 2365 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 A0A087X0B3 334 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 A0A1W2PQD8 194 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 ARHGEF35A5YM69 484 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 DCDC2CA8MYV0 355 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 J3QW42 95 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 TREHO43280 583 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 USO1O60763 962 aaKnown RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CD4P01730 458 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 PDGFAP04085 211 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CLTBP09497 229 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CYP2C9P11712 490 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 PFKFB1P16118 471 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 PCSK2P16519 638 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 MZF1P28698 734 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 STAT6P42226 847 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 GATA4P43694 442 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CLCN3P51790 818 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 POLGP54098 1239 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 NPEPPSP55786 919 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 ZNF200P98182 395 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 HYAL2Q12891 473 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 EMC2Q15006 297 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 TARBP2Q15633 366 aaKnown RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 XKR9Q5GH70 373 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 MARCH8Q5T0T0 291 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 TAF2Q6P1X5 1199 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 MTHFD1LQ6UB35 978 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 RUFY4Q6ZNE9 571 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CCDC73Q6ZRK6 1079 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 OTUD6AQ7L8S5 288 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 KCNK18Q7Z418 384 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 PDILTQ8N807 584 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 LRRC15Q8TF66 581 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 MRPS27Q92552 414 aaKnown RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 EDEM1Q92611 657 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 DHX38Q92620 1227 aaKnown RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 WNT8BQ93098 351 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 ZBTB10Q96DT7 871 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 GBP4Q96PP9 640 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CEP89Q96ST8 783 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 PLIN2Q99541 437 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 FAM49AQ9H0Q0 323 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 BHMT2Q9H2M3 363 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 ATP6V0A4Q9HBG4 840 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 PRDM5Q9NQX1 630 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 NRBP2Q9NSY0 501 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 ANKEF1Q9NU02 776 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 DBR1Q9UK59 544 aaKnown RBP7.03□□□□□ -1.28
PRKDC-211ENST00000546304 DNM3Q9UQ16 869 aa7.03□□□□□ -1.28
PRKDC-211ENST00000546304 SMIM35A0A1B0GVV1 85 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 GOLGA6L4A6NEF3 574 aa7.02□□□□□ -1.29
PRKDC-211ENST00000546304 C9orf172C9J069 976 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms