RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 RABGGTAQ92696 567 aa25.04■■□□□ 1.6
CHD4-214ENST00000545942 MMTAG2Q9BU76 263 aaKnown RBP25.04■■□□□ 1.6
CHD4-214ENST00000545942 KCNH6Q9H252 994 aa25.04■■□□□ 1.6
CHD4-214ENST00000545942 MAN1C1Q9NR34 630 aa25.04■■□□□ 1.6
CHD4-214ENST00000545942 TECTAO75443 2155 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 TDRD15B5MCY1 1934 aaKnown RBP25.03■■□□□ 1.6
CHD4-214ENST00000545942 K7ERI5 159 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 PTGESO14684 152 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 TADA2AO75478 443 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 GLUD1P00367 558 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 THP07101 528 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 C15orf39Q6ZRI6 1047 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 APBB1IPQ7Z5R6 666 aaPredicted RBP25.03■■□□□ 1.6
CHD4-214ENST00000545942 B3GALT6Q96L58 329 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 DRC1Q96MC2 740 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 TBC1D32Q96NH3 1257 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 PAAF1Q9BRP4 392 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.03■■□□□ 1.6
CHD4-214ENST00000545942 CACNG4Q9UBN1 327 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 SMC3Q9UQE7 1217 aa25.03■■□□□ 1.6
CHD4-214ENST00000545942 TRIOO75962 3097 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 SF3B1O75533 1304 aaKnown RBP eCLIP25.02■■□□□ 1.62e-6■■■■■ 106.8
CHD4-214ENST00000545942 CCDC169A6NNP5 214 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 HIP1RO75146 1068 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 NPTX2P47972 431 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 PEX3P56589 373 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 DMP1Q13316 513 aaPredicted RBP25.02■■□□□ 1.6
CHD4-214ENST00000545942 NT5DC1Q5TFE4 455 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 ZDHHC14Q8IZN3 488 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 DAW1Q8N136 415 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 PLCD3Q8N3E9 789 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 KREMEN2Q8NCW0 462 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 FEZF2Q8TBJ5 459 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 RUSC1Q9BVN2 902 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 SORCS3Q9UPU3 1222 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 GDAQ9Y2T3 454 aa25.02■■□□□ 1.6
CHD4-214ENST00000545942 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.02■■□□□ 1.6
CHD4-214ENST00000545942 PHLPP2Q6ZVD8 1323 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 CASTOR2A6NHX0 329 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 C1RP00736 705 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 CREMQ03060 361 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 MTMR3Q13615 1198 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 RINT1Q6NUQ1 792 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 CCDC149Q6ZUS6 474 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 C1orf186Q6ZWK4 172 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 KCNK18Q7Z418 384 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 CMASQ8NFW8 434 aaPredicted RBP25.01■■□□□ 1.59
CHD4-214ENST00000545942 ASIC4Q96FT7 647 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 C17orf75Q9HAS0 396 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 FNIP2Q9P278 1114 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 TNFSF13BQ9Y275 285 aa25.01■■□□□ 1.59
CHD4-214ENST00000545942 ZRSR1Q15695 479 aaKnown RBP25■■□□□ 1.59
CHD4-214ENST00000545942 NAB2Q15742 525 aa25■■□□□ 1.59
CHD4-214ENST00000545942 HYIQ5T013 277 aa25■■□□□ 1.59
CHD4-214ENST00000545942 ARL6IP4Q66PJ3 421 aaKnown RBP25■■□□□ 1.59
CHD4-214ENST00000545942 SUGP1Q8IWZ8 645 aaKnown RBP25■■□□□ 1.59
CHD4-214ENST00000545942 KCTD17Q8N5Z5 321 aa25■■□□□ 1.59
CHD4-214ENST00000545942 RIN2Q8WYP3 895 aaPredicted RBP25■■□□□ 1.59
CHD4-214ENST00000545942 ACSF2Q96CM8 615 aaPredicted RBP25■■□□□ 1.59
CHD4-214ENST00000545942 TIPINQ9BVW5 301 aa25■■□□□ 1.59
CHD4-214ENST00000545942 NT5C3AQ9H0P0 336 aa25■■□□□ 1.59
CHD4-214ENST00000545942 CXCL16Q9H2A7 254 aa25■■□□□ 1.59
CHD4-214ENST00000545942 TMEM134Q9H6X4 195 aa25■■□□□ 1.59
CHD4-214ENST00000545942 KMT5AQ9NQR1 393 aa25■■□□□ 1.59
CHD4-214ENST00000545942 RBM19Q9Y4C8 960 aaKnown RBP25■■□□□ 1.59
CHD4-214ENST00000545942 VWA3AA6NCI4 1184 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 KIF4AO95239 1232 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 MAPK7Q13164 816 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 CYP26C1Q6V0L0 522 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 UBALD2Q8IYN6 164 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 FBXL6Q8N531 539 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 HASPINQ8TF76 798 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 HDAC7Q8WUI4 952 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 ARHGAP28Q9P2N2 729 aa24.99■■□□□ 1.59
CHD4-214ENST00000545942 CCDC195A0A1B0GUA6 201 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 GUCY2CP25092 1073 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 LARP1BQ659C4 914 aaKnown RBP24.98■■□□□ 1.59
CHD4-214ENST00000545942 OTOP3Q7RTS5 596 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 PALB2Q86YC2 1186 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 ACO2Q99798 780 aaKnown RBP24.98■■□□□ 1.59
CHD4-214ENST00000545942 MRPL4Q9BYD3 311 aaKnown RBP24.98■■□□□ 1.59
CHD4-214ENST00000545942 RHOBTB2Q9BYZ6 727 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 PLEKHA4Q9H4M7 779 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 LIMD1Q9UGP4 676 aa24.98■■□□□ 1.59
CHD4-214ENST00000545942 TGM5O43548 720 aa24.97■■□□□ 1.59
CHD4-214ENST00000545942 ELAVL2Q12926 359 aaKnown RBP24.97■■□□□ 1.59
CHD4-214ENST00000545942 RTP2Q5QGT7 225 aa24.97■■□□□ 1.59
CHD4-214ENST00000545942 CDK5RAP3Q96JB5 506 aa24.97■■□□□ 1.59
CHD4-214ENST00000545942 PNMA5Q96PV4 448 aa24.97■■□□□ 1.59
CHD4-214ENST00000545942 TTPALQ9BTX7 342 aa24.97■■□□□ 1.59
CHD4-214ENST00000545942 BRD1O95696 1058 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 ASGR2P07307 311 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 SPATA31D3P0C874 917 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 MYBP10242 640 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 RPL17P18621 184 aaKnown RBP24.96■■□□□ 1.59
CHD4-214ENST00000545942 ZNF568Q3ZCX4 644 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 FAM171A1Q5VUB5 890 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 SPATA31D4Q6ZUB0 917 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 TAS1R3Q7RTX0 852 aa24.96■■□□□ 1.59
CHD4-214ENST00000545942 GLYCTKQ8IVS8 523 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms