RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SYT11Q9BT88 431 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 UBA5Q9GZZ9 404 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 WNT8AQ9H1J5 351 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 PPCSQ9HAB8 311 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 SIX2Q9NPC8 291 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 BATF3Q9NR55 127 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 DMAC2Q9NW81 257 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 GCNT4Q9P109 453 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 DDX20Q9UHI6 824 aaKnown RBP6.97□□□□□ -1.29
SNHG1-225ENST00000545920 SAP30BPQ9UHR5 308 aaKnown RBP6.97□□□□□ -1.29
SNHG1-225ENST00000545920 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 SAMM50Q9Y512 469 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 STRCQ7RTU9 1775 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 KIF13BQ9NQT8 1826 aa6.97□□□□□ -1.29
SNHG1-225ENST00000545920 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 WTIPA6NIX2 430 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 A6NJY4 79 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 CCT8L1PA6NM43 557 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 E9PMD0 336 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 O00370 1275 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 DDX3XO00571 662 aaKnown RBP eCLIP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 CDK2AP1O14519 115 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 DAPK3O43293 454 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 NDUFB5O43674 189 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 MGRN1O60291 552 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 FZD6O60353 706 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 AKAP3O75969 853 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 RARGP13631 454 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 AKR1B1P15121 316 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 DRD4P21917 467 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 CTNNA2P26232 953 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ABCD1P33897 745 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 RFC4P35249 363 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SKIV2L2P42285 1042 aaKnown RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 FMO5P49326 533 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PDE6CP51160 858 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PMS2P54278 862 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 GALCP54803 685 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SLC8A3P57103 927 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PPP2R5CQ13362 524 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 VPS72Q15906 364 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 TNFAIP8L3Q5GJ75 292 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 COX20Q5RI15 118 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 TRAPPC3LQ5T215 181 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SEL1L2Q5TEA6 688 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 DPP8Q6V1X1 898 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 INTS8Q75QN2 995 aaKnown RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PIGWQ7Z7B1 504 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SFR1Q86XK3 245 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 CATSPER3Q86XQ3 398 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 NELFCDQ8IXH7 590 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SP8Q8IXZ3 490 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 FUKQ8N0W3 1084 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 BBOF1Q8ND07 529 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 GIMAP7Q8NHV1 300 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 U2AF1L4Q8WU68 220 aaKnown RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 CCT6BQ92526 530 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 RAPGEF5Q92565 580 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 GRAMD1AQ96CP6 724 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 IFT74Q96LB3 600 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 NACC1Q96RE7 527 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 REEP2Q9BRK0 252 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PACSIN1Q9BY11 444 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 WDR11Q9BZH6 1224 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PLEKHA4Q9H4M7 779 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 TMEM206Q9H813 350 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ATP6V0A4Q9HBG4 840 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PARVGQ9HBI0 331 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SLC40A1Q9NP59 571 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ZDHHC18Q9NUE0 388 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 SMARCAL1Q9NZC9 954 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 EHD2Q9NZN4 543 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 UVRAGQ9P2Y5 699 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 APEX2Q9UBZ4 518 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PCDHA1Q9Y5I3 950 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 HRH3Q9Y5N1 445 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ACTL7BQ9Y614 415 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 COL2A1P02458 1487 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ASTN1O14525 1302 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 PASKQ96RG2 1323 aa6.96□□□□□ -1.3
SNHG1-225ENST00000545920 ZSCAN5CA6NGD5 496 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 KIAA0391O15091 583 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 NKRFO15226 690 aaKnown RBP eCLIP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 CAPN5O15484 640 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 RGS16O15492 202 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 TTI1O43156 1089 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 BUB1BO60566 1050 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 PPP1R11O60927 126 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 RTN2O75298 545 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 MED24O75448 989 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ATP5HO75947 161 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ADH1CP00326 375 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 FGGP02679 453 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ALAS1P13196 640 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms