RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 RBM43Q6ZSC3 357 aaKnown RBP12.99□□□□□ -0.33
LTBR-214ENST00000545445 ADGRD2Q7Z7M1 963 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 STRA6Q9BX79 667 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 CCDC113Q9H0I3 377 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 FZD8Q9H461 694 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
LTBR-214ENST00000545445 CLEC1BQ9P126 229 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 EXOC7Q9UPT5 735 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 CACNA1AO00555 2505 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 CACNA1HO95180 2353 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 ACKR2O00590 384 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 PPP1R37O75864 691 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 PRKCBP05771 671 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 GHRP10912 638 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 DNAJB1P25685 340 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 FOXK2Q01167 660 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 CATSPER4Q7RTX7 472 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 SMRP1Q8NCR6 262 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 TMEM40Q8WWA1 233 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 CCDC51Q96ER9 411 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 ACCSQ96QU6 501 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 FTHL17Q9BXU8 183 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 MRPL4Q9BYD3 311 aaKnown RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 MINDY3Q9H8M7 445 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 NOC2LQ9Y3T9 749 aaKnown RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 RWDD3Q9Y3V2 267 aa12.98□□□□□ -0.33
LTBR-214ENST00000545445 USP15Q9Y4E8 981 aaPredicted RBP12.98□□□□□ -0.33
LTBR-214ENST00000545445 H0Y858 1186 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 GLP2RO95838 553 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 SNRPFP62306 86 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 SIGLEC14Q08ET2 396 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 STK4Q13043 487 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 PRPF4BQ13523 1007 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 STIM1Q13586 685 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 MORC3Q14149 939 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 BTG3Q14201 252 aaPredicted RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 CBX2Q14781 532 aaPredicted RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 BMT2Q1RMZ1 405 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 EPM2AIP1Q7L775 607 aaPredicted RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 FAM228AQ86W67 206 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 MAP4K3Q8IVH8 894 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 GUF1Q8N442 669 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 ASIC4Q96FT7 647 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 RPGRIP1Q96KN7 1286 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 ERVK-5Q9HDB9 667 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 SLC39A2Q9NP94 309 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 AGPAT5Q9NUQ2 364 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 CGNQ9P2M7 1197 aaKnown RBP12.97□□□□□ -0.33
LTBR-214ENST00000545445 PADI3Q9ULW8 664 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 PLAGL2Q9UPG8 496 aa12.97□□□□□ -0.33
LTBR-214ENST00000545445 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 TSPAN1O60635 241 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 PIGRP01833 764 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 MYBP10242 640 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
LTBR-214ENST00000545445 AVPR2P30518 371 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 CD52P31358 61 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 NRIP1P48552 1158 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 AMHR2Q16671 573 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 NOTUMQ6P988 496 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 ASCL5Q7RTU5 278 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 TAS1R3Q7RTX0 852 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 EFHBQ8N7U6 833 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
LTBR-214ENST00000545445 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
LTBR-214ENST00000545445 PCDHGC5Q9Y5F6 944 aa12.96□□□□□ -0.33
LTBR-214ENST00000545445 MRPL42Q9Y6G3 142 aaKnown RBP12.96□□□□□ -0.33
LTBR-214ENST00000545445 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.34
LTBR-214ENST00000545445 MYH11P35749 1972 aa12.96□□□□□ -0.34
LTBR-214ENST00000545445 DMDP11532 3685 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 A0A1B0GUA9 196 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 N4BP3O15049 544 aa12.95□□□□□ -0.34
LTBR-214ENST00000545445 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
LTBR-214ENST00000545445 TOM1L1O75674 476 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms