RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 EMC3Q9P0I2 261 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 SRPRBQ9Y5M8 271 aaKnown RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 TRIM49BA6NDI0 452 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 H3BQF6 201 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 MAPK10P53779 464 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 LRRC74BQ6ZQY2 392 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 CITED4Q96RK1 184 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 TSPAN18Q96SJ8 248 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 OLFM1Q99784 485 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 FUT8Q9BYC5 575 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 USP44Q9H0E7 712 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 SORBS3O60504 671 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 GHRP10912 638 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 CCDC130P13994 396 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 KIAA1755Q5JYT7 1200 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 GALNT17Q6IS24 598 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 FOXR1Q6PIV2 292 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 RHPN2Q8IUC4 686 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 BBS5Q8N3I7 341 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 HNRNPLLQ8WVV9 542 aaKnown RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 CCSER1Q9C0I3 900 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 HSPBP1Q9NZL4 362 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PHTF1Q9UMS5 762 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 SOS2Q07890 1332 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 EYA2O00167 538 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 TNFAIP8O95379 198 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 CDH3P22223 829 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 CASP5P51878 434 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 AK8Q96MA6 479 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 WNT8AQ9H1J5 351 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PSTPIP2Q9H939 334 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PSMC3IPQ9P2W1 217 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 S100A6P06703 90 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PSMA4P25789 261 aaKnown RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 MYBPC2Q14324 1141 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 OR6B2Q6IFH4 312 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PCYOX1LQ8NBM8 494 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 GDPD5Q8WTR4 605 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PDCD6IPQ8WUM4 868 aaKnown RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 NRDE2Q9H7Z3 1164 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 MAD2L2Q9UI95 211 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 ADAM30Q9UKF2 790 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 WDR62O43379 1518 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 TEX33O43247 280 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 UBOX5O94941 541 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 SLC1A4P43007 532 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 BRDTQ58F21 947 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PCNX4Q63HM2 1172 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 GATAD2AQ86YP4 633 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PNKPQ96T60 521 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 C1orf50Q9BV19 199 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 EPB41L4AQ9HCS5 686 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 ENTPD7Q9NQZ7 604 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 RBM12Q9NTZ6 932 aaKnown RBP9.08□□□□□ -0.96
ATXN3-216ENST00000545170 RIMS2Q9UQ26 1411 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 GAP43P17677 238 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SLC34A1Q06495 639 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 DGUOKQ16854 277 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZSWIM7Q19AV6 140 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 MEI1Q5TIA1 1274 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 LAYNQ6UX15 382 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF564Q8TBZ8 553 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CYP26B1Q9NR63 512 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SMARCAL1Q9NZC9 954 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 HEY2Q9UBP5 337 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF212Q9UDV6 495 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CNOT8Q9UFF9 292 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 HBS1LQ9Y450 684 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 LOC100653049A0A140TA62 436 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 KRT34O76011 436 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 MED26O95402 600 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ATP5JP18859 108 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SERPINH1P50454 418 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ARSEP51690 589 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 LRRC63Q05C16 580 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 DNAJC3Q13217 504 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 PABPC4Q13310 644 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 NEDD8Q15843 81 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF284Q2VY69 593 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 AASDHQ4L235 1098 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF57Q68EA5 555 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 TTC13Q8NBP0 860 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ULK4Q96C45 1275 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ANKRD36BP1Q96IX9 119 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ACCSQ96QU6 501 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 DDX20Q9UHI6 824 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SNX13Q9Y5W8 968 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 FGD5Q6ZNL6 1462 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 A0A1W2PRG6 482 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 TRIM43BA6NCK2 446 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 PHGDHO43175 533 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZYXQ15942 572 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CWF19L1Q69YN2 538 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 METTL13Q8N6R0 699 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 RNF25Q96BH1 459 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 OTUB1Q96FW1 271 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms