RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 AGO4Q9HCK5 861 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 ANKEF1Q9NU02 776 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 TBK1Q9UHD2 729 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 DBR1Q9UK59 544 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 TBX20Q9UMR3 447 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ZHX2Q9Y6X8 837 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 EXOC1LA0A1B0GW35 172 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 GOLGA8SH3BPF8 625 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 EPHB6O15197 1021 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 AGTP01019 485 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PSMA2P25787 234 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 YARSP54577 528 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 DYNC1I2Q13409 638 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 CYP4F22Q6NT55 531 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PCGF5Q86SE9 256 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 RHOT1Q8IXI2 618 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 HEMGNQ9BXL5 484 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 NUF2Q9BZD4 464 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 GANQ9H2C0 597 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 RPF1Q9H9Y2 349 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 PARVAQ9NVD7 372 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 DDX56Q9NY93 547 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 RBAKQ9NYW8 714 aaPredicted RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 FAM198AQ9UFP1 575 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 AGO2Q9UKV8 859 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 IVNS1ABPQ9Y6Y0 642 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ABCA3Q99758 1704 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ANKRD65E5RJM6 399 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 DGAT1O75907 488 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 DNAJC8O75937 253 aaPredicted RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 KRT14P02533 472 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 COMTP21964 271 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 IRAK1P51617 712 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 IRX1P78414 480 aaPredicted RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 DRP2Q13474 957 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 TRIM68Q6AZZ1 485 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 XRRA1Q6P2D8 792 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 CENPUQ71F23 418 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 OTOP1Q7RTM1 612 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 APTXQ7Z2E3 356 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 SAMD3Q8N6K7 520 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 CHMP6Q96FZ7 201 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 TTC25Q96NG3 672 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 TAAR1Q96RJ0 339 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ZSWIM1Q9BR11 485 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ADPGKQ9BRR6 497 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 TLR10Q9BXR5 811 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 RANBP17Q9H2T7 1088 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 SAYSD1Q9NPB0 183 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 DNAJC17Q9NVM6 304 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 TPX2Q9ULW0 747 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 CLEC11AQ9Y240 323 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 CLDN3O15551 220 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 EXTL3O43909 919 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 PPP1R11O60927 126 aaPredicted RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 SLITRK3O94933 977 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 LCA5LO95447 670 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 GLI1P08151 1106 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 CLTAP09496 248 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MARSP56192 900 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 RNASELQ05823 741 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 PTGISQ16647 500 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 DACT2Q5SW24 774 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ANKRD20A3Q5VUR7 823 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ZNF677Q86XU0 584 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 TAB3Q8N5C8 712 aaPredicted RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 AGBL3Q8NEM8 1001 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ZMAT2Q96NC0 199 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 MED15Q96RN5 788 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MRIQ9BWK5 157 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 KCTD10Q9H3F6 313 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ZWILCHQ9H900 591 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MYOZ2Q9NPC6 264 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 KCNQ5Q9NR82 932 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 GINM1Q9NU53 330 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 FBXO40Q9UH90 709 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 FAF1Q9UNN5 650 aaPredicted RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 AKT3Q9Y243 479 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MYH6P13533 1939 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ASTN1O14525 1302 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 CCDC88AQ3V6T2 1871 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 H7C0C1 242 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 RBAK-RBAKDNI3L0D1 243 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 INO80B-WBP1J3KQ70 363 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MEIS2O14770 477 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ATMINO43313 823 aaPredicted RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 SGPL1O95470 568 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 SYF2O95926 243 aaKnown RBP6.16□□□□□ -1.42
VPS50-220ENST00000544910 SRGAP2CP0DJJ0 459 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MARK3P27448 753 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 LSP1P33241 339 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MSH2P43246 934 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ATP5OP48047 213 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ADCY1Q08828 1119 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 MYBPC2Q14324 1141 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 EMC2Q15006 297 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 ZNF699Q32M78 642 aa6.16□□□□□ -1.42
VPS50-220ENST00000544910 CYFIP1Q7L576 1253 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms