RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TGFB1I1O43294 461 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 TOM1L1O75674 476 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 SERPINC1P01008 464 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 EIF4BP23588 611 aaKnown RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 AXLP30530 894 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 SSTR3P32745 418 aaPredicted RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 PSMC2P35998 433 aaKnown RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 PMS1P54277 932 aaKnown RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 MARSP56192 900 aaKnown RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 ENPEPQ07075 957 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 BFSP2Q13515 415 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 KCNJ12Q14500 433 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 CCDC40Q4G0X9 1142 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 TCP11X2Q5H9J9 407 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 RUFY4Q6ZNE9 571 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 LRRC55Q6ZSA7 311 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 KSR1Q8IVT5 923 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 XXYLT1Q8NBI6 393 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 CAGE1Q8TC20 777 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 POMGNT1Q8WZA1 660 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 MED15Q96RN5 788 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 KIFC3Q9BVG8 833 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 CELF4Q9BZC1 486 aaKnown RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 ADAMTS10Q9H324 1103 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 DMAC2Q9NW81 257 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 LIMA1Q9UHB6 759 aaKnown RBP10.38□□□□□ -0.75
YBX3-215ENST00000544504 STYXL1Q9Y6J8 313 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 SQORQ9Y6N5 450 aa10.38□□□□□ -0.75
YBX3-215ENST00000544504 CNTNAP2Q9UHC6 1331 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 LRRC10BA6NIK2 292 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 CLDN3O15551 220 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 EXOC3O60645 756 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 LPXNO60711 386 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 GPR32O75388 356 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 KRT13P13646 458 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 DARSP14868 501 aaKnown RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 RFC2P35250 354 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 MATR3P43243 847 aaKnown RBP eCLIP10.37□□□□□ -0.75
YBX3-215ENST00000544504 MTIF2P46199 727 aaKnown RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 ZNF200P98182 395 aaPredicted RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 FANCCQ00597 558 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 POU5F1Q01860 360 aaKnown RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 MBTD1Q05BQ5 628 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 KCNA1Q09470 495 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 KIZQ2M2Z5 673 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 LEXMQ3ZCV2 418 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 TSHZ1Q6ZSZ6 1077 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 TAS1R3Q7RTX0 852 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 CATSPER4Q7RTX7 472 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 HERC6Q8IVU3 1022 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 CCDC51Q96ER9 411 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 CNOT6LQ96LI5 555 aaKnown RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 ADPGKQ9BRR6 497 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 TCHPQ9BT92 498 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 TRIM5Q9C035 493 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 UBE2ZQ9H832 354 aaPredicted RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 SAMSN1Q9NSI8 373 aaKnown RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 HSPBP1Q9NZL4 362 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 ARMCX3Q9UH62 379 aaPredicted RBP10.37□□□□□ -0.75
YBX3-215ENST00000544504 TNFSF13BQ9Y275 285 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 SIP14410 1827 aa10.37□□□□□ -0.75
YBX3-215ENST00000544504 N4BP3O15049 544 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 GPR182O15218 404 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 CLIC2O15247 247 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 DCXO43602 365 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 EXTL3O43909 919 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 STX10O60499 249 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 ARHGEF15O94989 841 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 PARNO95453 639 aaKnown RBP10.36□□□□□ -0.75
YBX3-215ENST00000544504 THPOP40225 353 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 CYP2J2P51589 502 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 UBASH3AP57075 661 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 RBL2Q08999 1139 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 HIC1Q14526 733 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 SURF1Q15526 300 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 MAN2A1Q16706 1144 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
YBX3-215ENST00000544504 DCAF4L1Q3SXM0 396 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 FAM26DQ5JW98 314 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 ATF7IP2Q5U623 682 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 CEP135Q66GS9 1140 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 MPZL3Q6UWV2 235 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 INTS8Q75QN2 995 aaKnown RBP10.36□□□□□ -0.75
YBX3-215ENST00000544504 DEFB128Q7Z7B8 93 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 GPD1LQ8N335 351 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 ZBTB10Q96DT7 871 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 MRFAP1L1Q96HT8 127 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 ACO2Q99798 780 aaKnown RBP10.36□□□□□ -0.75
YBX3-215ENST00000544504 TUBGCP2Q9BSJ2 902 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 TARS2Q9BW92 718 aaKnown RBP10.36□□□□□ -0.75
YBX3-215ENST00000544504 HSD3B7Q9H2F3 369 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 AGO2Q9UKV8 859 aaKnown RBP10.36□□□□□ -0.75
YBX3-215ENST00000544504 GINS2Q9Y248 185 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 CDY2AQ9Y6F7 541 aa10.36□□□□□ -0.75
YBX3-215ENST00000544504 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms