RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ZNFX1Q9P2E3 1918 aaKnown RBP19.06■□□□□ 0.64
SCARB1-208ENST00000544327 SRRM3A6NNA2 597 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-208ENST00000544327 KIAA0391O15091 583 aaKnown RBP19.05■□□□□ 0.64
SCARB1-208ENST00000544327 ZEB2O60315 1214 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 PPFIA2O75334 1257 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 NR1D1P20393 614 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 CHRNA3P32297 505 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 ACTR2P61160 394 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 ZNF211Q13398 564 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-208ENST00000544327 BIRC3Q13489 604 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 NOL9Q5SY16 702 aaKnown RBP19.05■□□□□ 0.64
SCARB1-208ENST00000544327 CCDC60Q8IWA6 550 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-208ENST00000544327 KRT35Q92764 455 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 ZKSCAN4Q969J2 545 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-208ENST00000544327 IFT74Q96LB3 600 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 ERVK-5Q9HDB9 667 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 PCYOX1Q9UHG3 505 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 TRPC6Q9Y210 931 aa19.05■□□□□ 0.64
SCARB1-208ENST00000544327 GOLGA6L10A6NI86 522 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 GRIN3BO60391 1043 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 SUPT20HL2P0C7V6 817 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 ICAM3P32942 547 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 CTNNA1P35221 906 aaKnown RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 HMGCS2P54868 508 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 ZNF844Q08AG5 666 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 CYP1B1Q16678 543 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 GNPTABQ3T906 1256 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 SUPT20HL1Q3ZLR7 823 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 XKR3Q5GH77 459 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 KCTD16Q68DU8 428 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 ACAD10Q6JQN1 1059 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 MIS18BP1Q6P0N0 1132 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 RUFY4Q6ZNE9 571 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 PROCA1Q8NCQ7 364 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 ZNF564Q8TBZ8 553 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 POP1Q99575 1024 aaKnown RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 TRIM51Q9BSJ1 452 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 TSPYL1Q9H0U9 437 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 POLR3FQ9H1D9 316 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 A1CFQ9NQ94 594 aaKnown RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 TOPORSQ9NS56 1045 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 SEPT9Q9UHD8 586 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 RASAL2Q9UJF2 1139 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 STYXL1Q9Y6J8 313 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 EXTL3O43909 919 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 MYZAPP0CAP1 466 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 GBP1P32455 592 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 FLT3P36888 993 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 PTGIRP43119 386 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 SOX10P56693 466 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 MESDQ14696 234 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 SEL1L2Q5TEA6 688 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 AGBL2Q5U5Z8 902 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 NAA35Q5VZE5 725 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 TRMT1LQ7Z2T5 733 aaKnown RBP19.04■□□□□ 0.64
SCARB1-208ENST00000544327 RUNDC3BQ96NL0 473 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 NUP85Q9BW27 656 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 ZDHHC18Q9NUE0 388 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 PCDHA3Q9Y5H8 950 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 DOCK5Q9H7D0 1870 aa19.04■□□□□ 0.64
SCARB1-208ENST00000544327 HNRNPDLO14979 420 aaKnown RBP19.03■□□□□ 0.64
SCARB1-208ENST00000544327 ATG7O95352 703 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 PIGRP01833 764 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 PSMD6Q15008 389 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 CLEC16AQ2KHT3 1053 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 DNAJC21Q5F1R6 531 aaKnown RBP19.03■□□□□ 0.64
SCARB1-208ENST00000544327 JAMLQ86YT9 394 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 PRELID2Q8N945 189 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 DHX38Q92620 1227 aaKnown RBP19.03■□□□□ 0.64
SCARB1-208ENST00000544327 ZNF653Q96CK0 615 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 FMO2Q99518 471 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 RSPH14Q9UHP6 348 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 WDR90Q96KV7 1748 aa19.03■□□□□ 0.64
SCARB1-208ENST00000544327 MYO1CO00159 1063 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 MARCKSL1P49006 195 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 ZNF677Q86XU0 584 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 ARFGAP2Q8N6H7 521 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 TATDN2Q93075 761 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 KLRG1Q96E93 195 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 DPH5Q9H2P9 285 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 LCMT1Q9UIC8 334 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 PPP2R3BQ9Y5P8 575 aa19.02■□□□□ 0.64
SCARB1-208ENST00000544327 TMEM110-MUSTN1A8MSY1 372 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 TULP1O00294 542 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-208ENST00000544327 PODXLO00592 558 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 DHX9Q08211 1270 aaKnown RBP19.02■□□□□ 0.63
SCARB1-208ENST00000544327 PDCLQ13371 301 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 C12orf50Q8NA57 414 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-208ENST00000544327 BCAS4Q8TDM0 211 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 PSPC1Q8WXF1 523 aaKnown RBP19.02■□□□□ 0.63
SCARB1-208ENST00000544327 FAM213AQ9BRX8 229 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 ACP6Q9NPH0 428 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 AVENQ9NQS1 362 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-208ENST00000544327 HOXC10Q9NYD6 342 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 TELO2Q9Y4R8 837 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 MAFBQ9Y5Q3 323 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-208ENST00000544327 GJA3Q9Y6H8 435 aa19.02■□□□□ 0.63
SCARB1-208ENST00000544327 SPDYE16A6NNV3 312 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-208ENST00000544327 MYO1FO00160 1098 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms