RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ABCD1P33897 745 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 FMO1Q01740 532 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 VGLL4Q14135 290 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 HLTFQ14527 1009 aaKnown RBP eCLIP14.98□□□□□ -0.01
MSH2-206ENST00000543555 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 LEKR1Q6ZMV7 388 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 DNERQ8NFT8 737 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 CCDC26Q8TAB7 109 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 FAM213AQ9BRX8 229 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 LCTP09848 1927 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 MMEP08473 750 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 CYP11B1P15538 503 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 POLGP54098 1239 aaPredicted RBP14.98□□□□□ -0.01
MSH2-206ENST00000543555 EMC2Q15006 297 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 CYFIP1Q7L576 1253 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 MAATS1Q7Z4T9 603 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 MTA2O94776 668 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 ATP4AP20648 1035 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 PDE6CP51160 858 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 CNTN2Q02246 1040 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 FSTL1Q12841 308 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
MSH2-206ENST00000543555 ALG3Q92685 438 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 ZNF302Q9NR11 478 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 KCNG1Q9UIX4 513 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 MAFBQ9Y5Q3 323 aaPredicted RBP14.97□□□□□ -0.01
MSH2-206ENST00000543555 SYNGAP1Q96PV0 1343 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 WDR90Q96KV7 1748 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 ZNF233A6NK53 670 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 MIF4GDA9UHW6 222 aaKnown RBP14.97□□□□□ -0.01
MSH2-206ENST00000543555 RPS6KA5O75582 802 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 ATG7O95352 703 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 HSPA9P38646 679 aaKnown RBP14.97□□□□□ -0.01
MSH2-206ENST00000543555 CDR2Q01850 454 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 ANKRD35Q8N283 1001 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 PIK3R5Q8WYR1 880 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 OTUD5Q96G74 571 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 NAP1L3Q99457 506 aaPredicted RBP14.97□□□□□ -0.01
MSH2-206ENST00000543555 SNCAIPQ9Y6H5 919 aa14.97□□□□□ -0.01
MSH2-206ENST00000543555 TTI1O43156 1089 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
MSH2-206ENST00000543555 OATP04181 439 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 LIG4P49917 911 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 POU5F1Q01860 360 aaKnown RBP14.96□□□□□ -0.01
MSH2-206ENST00000543555 ZNF211Q13398 564 aaPredicted RBP14.96□□□□□ -0.01
MSH2-206ENST00000543555 DDX42Q86XP3 938 aaKnown RBP eCLIP14.96□□□□□ -0.01
MSH2-206ENST00000543555 TATDN2Q93075 761 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 ARL8AQ96BM9 186 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 NR2E1Q9Y466 385 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 EXTL3O43909 919 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 TTMPQ5BVD1 217 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 TREML2Q5T2D2 321 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 NAA35Q5VZE5 725 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 LBX2Q6XYB7 198 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 DHX38Q92620 1227 aaKnown RBP14.96□□□□□ -0.01
MSH2-206ENST00000543555 ELMO3Q96BJ8 720 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 RPS6KC1Q96S38 1066 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 KIAA1586Q9HCI6 787 aa14.96□□□□□ -0.01
MSH2-206ENST00000543555 PTENP60484 403 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 GCNT1Q02742 428 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 CLUL1Q15846 466 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 C15orf39Q6ZRI6 1047 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 SEPT14Q6ZU15 432 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 ENOSF1Q7L5Y1 443 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 DDX1Q92499 740 aaKnown RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 SEC14L1Q92503 715 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 KCNN1Q92952 543 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 TMEM143Q96AN5 459 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 DHX33Q9H6R0 707 aaKnown RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 CHORDC1Q9UHD1 332 aaPredicted RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 TMEM110-MUSTN1A8MSY1 372 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 ZC3H11AO75152 810 aaKnown RBP eCLIP14.95□□□□□ -0.02
MSH2-206ENST00000543555 CYP1A2P05177 515 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 ALDH5A1P51649 535 aaPredicted RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 PPP2R5EQ16537 467 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 PNMA8AQ86V59 439 aaPredicted RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 CD302Q8IX05 232 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 UBL4BQ8N7F7 174 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 PI4K2AQ9BTU6 479 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 CELF4Q9BZC1 486 aaKnown RBP14.95□□□□□ -0.02
MSH2-206ENST00000543555 PORCNQ9H237 461 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 NEUROG2Q9H2A3 272 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 STYXL1Q9Y6J8 313 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 GOLGA6L10A0A0M3HER8 536 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 KRT14P02533 472 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 CLDN10P78369 228 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 STRN3Q13033 797 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 MESDQ14696 234 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 ASAP3Q8TDY4 903 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 MORC4Q8TE76 937 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 ZNF516Q92618 1163 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 KRT35Q92764 455 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 ZSWIM1Q9BR11 485 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 GTF3C4Q9UKN8 822 aa14.95□□□□□ -0.02
MSH2-206ENST00000543555 DAPK3O43293 454 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 SHOX2O60902 331 aaPredicted RBP14.94□□□□□ -0.02
MSH2-206ENST00000543555 COMTP21964 271 aa14.94□□□□□ -0.02
MSH2-206ENST00000543555 GLRA2P23416 452 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms