RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 GOLGA8JA6NMD2 632 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 PSMA7O14818 248 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 KIAA0391O15091 583 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 EXOC3O60645 756 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 ZC3H11AO75152 810 aaKnown RBP eCLIP6.88□□□□□ -1.31
LTBR-212ENST00000543542 OFD1O75665 1012 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CLSTN1O94985 981 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 THP07101 528 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CLTAP09496 248 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CXCL8P10145 99 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 ATF7P17544 494 aaPredicted RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 GARTP22102 1010 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 PROZP22891 400 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CA8P35219 290 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CTNNB1P35222 781 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 PPP1R2P41236 205 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 TNFSF9P41273 254 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 PRCPP42785 496 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 ACOT2P49753 483 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 SCNN1GP51170 649 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 SNRPFP62306 86 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 HTRA4P83105 476 aaPredicted RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 EHHADHQ08426 723 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 SKOR2Q2VWA4 1001 aaPredicted RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 CLLU1OSQ5K130 101 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CCDC183Q5T5S1 534 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CEP135Q66GS9 1140 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CAVIN1Q6NZI2 390 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 SLC39A4Q6P5W5 647 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 SASS6Q6UVJ0 657 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 AGMOQ6ZNB7 445 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 ZNF598Q86UK7 904 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 GPD1LQ8N335 351 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 GUF1Q8N442 669 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 TRIML1Q8N9V2 468 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 RDH13Q8NBN7 331 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 RSPH1Q8WYR4 309 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CASD1Q96PB1 797 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CBWD1Q9BRT8 395 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 STRA6Q9BX79 667 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 CERS4Q9HA82 394 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 PTPRHQ9HD43 1115 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 AGPAT3Q9NRZ7 376 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 RNF19AQ9NV58 838 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 TYW1Q9NV66 732 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 CGNQ9P2M7 1197 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 DACH1Q9UI36 760 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 YBX2Q9Y2T7 364 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 R3HCC1Q9Y3T6 440 aaKnown RBP6.88□□□□□ -1.31
LTBR-212ENST00000543542 RWDD3Q9Y3V2 267 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 PCDHB12Q9Y5F1 795 aa6.88□□□□□ -1.31
LTBR-212ENST00000543542 KIAA1671Q9BY89 1806 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 ZMYM2Q9UBW7 1377 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 BICDL2A1A5D9 508 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 LINC01553A4QN01 128 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 ZNF233A6NK53 670 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 PDXKO00764 312 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 XPOTO43592 962 aaKnown RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 EXTL3O43909 919 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 CSPG5O95196 566 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 IL18RAPO95256 599 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 LAG3P18627 525 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 RPL13P26373 211 aaKnown RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 OR1G1P47890 313 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 ALDH7A1P49419 539 aaKnown RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 GRIK3Q13003 919 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 MORC3Q14149 939 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 TPD52L1Q16890 204 aaPredicted RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 BMT2Q1RMZ1 405 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 GLRA4Q5JXX5 417 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 CREBRFQ8IUR6 639 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 TMEM192Q8IY95 271 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 XXYLT1Q8NBI6 393 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 FBXO22Q8NEZ5 403 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 SPATA20Q8TB22 786 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 ARNTL2Q8WYA1 636 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 KCNN1Q92952 543 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 ZNF689Q96CS4 500 aaPredicted RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 KIF12Q96FN5 646 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 FAM161BQ96MY7 647 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 ZNF558Q96NG5 402 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 SAMD11Q96NU1 681 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 TGS1Q96RS0 853 aaKnown RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 FNBP1Q96RU3 617 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 HAPLN2Q9GZV7 340 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 KIAA1586Q9HCI6 787 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 SLC38A7Q9NVC3 462 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 TBC1D13Q9NVG8 400 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 RBAKQ9NYW8 714 aaPredicted RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 HSPBP1Q9NZL4 362 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 FRMD4BQ9Y2L6 1034 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
LTBR-212ENST00000543542 CITO14578 2027 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 RALGAPA2Q2PPJ7 1873 aa6.87□□□□□ -1.31
LTBR-212ENST00000543542 CARNS1A5YM72 827 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms