RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 SYNE3Q6ZMZ3 975 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 Q6ZUG5 572 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 NPAS4Q8IUM7 802 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 MRPL43Q8N983 215 aaKnown RBP7.23□□□□□ -1.25
CIT-213ENST00000543324 SPRYD3Q8NCJ5 442 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 LINC01599Q8WXQ3 324 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 PGBD1Q96JS3 809 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 FCRL3Q96P31 734 aaPredicted RBP7.23□□□□□ -1.25
CIT-213ENST00000543324 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
CIT-213ENST00000543324 TM6SF1Q9BZW5 370 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 SEMA4CQ9C0C4 833 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 SMARCAD1Q9H4L7 1026 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 SFXN1Q9H9B4 322 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 ZSWIM6Q9HCJ5 1215 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 SQORQ9Y6N5 450 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 OTOGQ6ZRI0 2925 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 IGSF9BQ9UPX0 1349 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 MUC22E2RYF6 1773 aaPredicted RBP7.23□□□□□ -1.25
CIT-213ENST00000543324 F8P00451 2351 aa7.23□□□□□ -1.25
CIT-213ENST00000543324 COL1A2P08123 1366 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 RRN3P2A6NIE6 340 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 CDX4O14627 284 aaPredicted RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 INSRRP14616 1297 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 ATP4AP20648 1035 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 PDIA3P30101 505 aaKnown RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 GATMP50440 423 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 SLC26A2P50443 739 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 SATB1Q01826 763 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 SP4Q02446 784 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 PPFIA1Q13136 1202 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 SMC1AQ14683 1233 aaKnown RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 PLCB4Q15147 1175 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 B3GNT9Q6UX72 402 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 C15orf39Q6ZRI6 1047 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 RUFY3Q7L099 469 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 CCDC60Q8IWA6 550 aaPredicted RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 FAM177A1Q8N128 213 aaPredicted RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 LINC01465Q8N7H1 131 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 COLGALT1Q8NBJ5 622 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 GTPBP4Q9BZE4 634 aaKnown RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 SLC32A1Q9H598 525 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 TMEM9BQ9NQ34 198 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 SH3GLB2Q9NR46 395 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 LMBRD1Q9NUN5 540 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 PUF60Q9UHX1 559 aaKnown RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 DNMT3LQ9UJW3 386 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 R3HCC1Q9Y3T6 440 aaKnown RBP7.22□□□□□ -1.25
CIT-213ENST00000543324 NUMBLQ9Y6R0 609 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 ATG2BQ96BY7 2078 aa7.22□□□□□ -1.25
CIT-213ENST00000543324 ZMYM2Q9UBW7 1377 aa7.21□□□□□ -1.25
CIT-213ENST00000543324 SMIM35A0A1B0GVV1 85 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ERVH48-1M5A8F1 160 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 IPO5O00410 1097 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 KIF20AO95235 890 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 GHRP10912 638 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 CR2P20023 1033 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ELAVL4P26378 380 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 MARK3P27448 753 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 MRPS6P82932 125 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 SETQ01105 290 aaPredicted RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 RABEP1Q15276 862 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ZNF423Q2M1K9 1284 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ZSCAN23Q3MJ62 389 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 SPOUT1Q5T280 376 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 ZNF574Q6ZN55 896 aaPredicted RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 FAM43BQ6ZT52 329 aaPredicted RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 TMC7Q7Z402 723 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 CABP7Q86V35 215 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ZNF687Q8N1G0 1237 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 REXO1Q8N1G1 1221 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 DAGLBQ8NCG7 672 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 MYRIPQ8NFW9 859 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 SLC22A17Q8WUG5 538 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 DNAJB3Q8WWF6 145 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 STAMQ92783 540 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 PHKBQ93100 1093 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ZBTB10Q96DT7 871 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 ZNF274Q96GC6 653 aaPredicted RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 PRIMPOLQ96LW4 560 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 MBOAT7Q96N66 472 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 SDF4Q9BRK5 362 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 AGO3Q9H9G7 860 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 NCOA5Q9HCD5 579 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 PKD2L1Q9P0L9 805 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 PCDHA2Q9Y5H9 948 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 MAFBQ9Y5Q3 323 aaPredicted RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 CDY2AQ9Y6F7 541 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 SPTBN1Q01082 2364 aaKnown RBP7.21□□□□□ -1.26
CIT-213ENST00000543324 CENPEQ02224 2701 aa7.21□□□□□ -1.26
CIT-213ENST00000543324 CYP3A7-CYP3A51PA0A087WV96 503 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 K7ESF4 209 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 PAPSS2O95340 614 aaPredicted RBP7.2□□□□□ -1.26
CIT-213ENST00000543324 C22orf31O95567 290 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 C6P13671 934 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 CYP3A7P24462 503 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 ITPKBP27987 946 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 PSMA5P28066 241 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 GNA11P29992 359 aa7.2□□□□□ -1.26
CIT-213ENST00000543324 ZNF76P36508 570 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms