RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	RASA3	Q14644	834 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	CRYM	Q14894	314 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	NAA25	Q14CX7	972 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	VPS72	Q15906	364 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	NSMCE1	Q8WV22	266 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	KLHL29	Q96CT2	875 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	THOC1	Q96FV9	657 aa	Known RBP	13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	LRRC37A	A6NMS7	1700 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	LY75	O60449	1722 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	AR	P10275	920 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	MXI1	P50539	228 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	FMO1	Q01740	532 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	C1orf220	Q5T0J3	134 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	SPATA21	Q7Z572	469 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	KIAA0825	Q8IV33	1275 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	FAM71A	Q8IYT1	594 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	KIRREL3	Q8IZU9	778 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	GBP7	Q8N8V2	638 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	ZSWIM2	Q8NEG5	633 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	ZDHHC15	Q96MV8	337 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	C8orf37	Q96NL8	207 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	WDR11	Q9BZH6	1224 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	TMEM206	Q9H813	350 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	ARL2BP	Q9Y2Y0	163 aa		13.84	□□□□□ -0.19
DDX11-223	ENST00000542838	DDX39A	O00148	427 aa	Known RBP	13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	GH2	P01242	217 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	POLR2M	P0CAP2	368 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	BNIP1	Q12981	228 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	TRIP13	Q15645	432 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	CEP55	Q53EZ4	464 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	KIF2B	Q8N4N8	673 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	XXYLT1	Q8NBI6	393 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	PLEKHO2	Q8TD55	490 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	CKAP2	Q8WWK9	683 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	NGLY1	Q96IV0	654 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	KREMEN1	Q96MU8	473 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	ACCS	Q96QU6	501 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	PLVAP	Q9BX97	442 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	TEKT3	Q9BXF9	490 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	GTF3C4	Q9UKN8	822 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	FSCN2	O14926	492 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	TP73	O15350	636 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	ECM2	O94769	699 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	BRAF	P15056	766 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	ITIH2	P19823	946 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	KYNU	Q16719	465 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	CCDC174	Q6PII3	467 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	RHBDF2	Q6PJF5	856 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	PADI6	Q6TGC4	694 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	PRCC	Q92733	491 aa	Predicted RBP	13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	TMEM117	Q9H0C3	514 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	CHST7	Q9NS84	486 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	LRRC4B	Q9NT99	713 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	HSPBP1	Q9NZL4	362 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	LARS	Q9P2J5	1176 aa	Known RBP	13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	UVRAG	Q9P2Y5	699 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	PNMA3	Q9UL41	463 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	STK38L	Q9Y2H1	464 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	C15orf41	Q9Y2V0	281 aa		13.83	□□□□□ -0.2
DDX11-223	ENST00000542838	TTC4	O95801	387 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	STX2	P32856	288 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	ITGA8	P53708	1063 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	JAG1	P78504	1218 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	PSPC1	Q8WXF1	523 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	SNF8	Q96H20	258 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	KCNQ5	Q9NR82	932 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838		A0A1W2PRG0	241 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838		O00370	1275 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	THAP12	O43422	761 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	GH1	P01241	217 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	ALAD	P13716	330 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	STAT2	P52630	851 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	MFAP3	P55082	362 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	RBM26	Q5T8P6	1007 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	ATG4A	Q8WYN0	398 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	SLCO2A1	Q92959	643 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	IFT74	Q96LB3	600 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	TGS1	Q96RS0	853 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	PLCD4	Q9BRC7	762 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	NOP53	Q9NZM5	478 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	TBK1	Q9UHD2	729 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	GOLGA8IP	A6NC78	632 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	GOLGA8J	A6NMD2	632 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838		A8MUI8	341 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	HGS	O14964	777 aa	Predicted RBP	13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	GJB6	O95452	261 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	KRT16	P08779	473 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	MPP2	Q14168	576 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	FITM2	Q8N6M3	262 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	IDI2	Q9BXS1	227 aa		13.82	□□□□□ -0.2
DDX11-223	ENST00000542838	CYP11B1	P15538	503 aa		13.81	□□□□□ -0.2
DDX11-223	ENST00000542838	ADCY1	Q08828	1119 aa		13.81	□□□□□ -0.2
DDX11-223	ENST00000542838	EHMT1	Q9H9B1	1298 aa		13.81	□□□□□ -0.2
DDX11-223	ENST00000542838	DBNDD1	Q9H9R9	158 aa		13.81	□□□□□ -0.2
DDX11-223	ENST00000542838	RXFP1	Q9HBX9	757 aa		13.81	□□□□□ -0.2
DDX11-223	ENST00000542838	PKD2L1	Q9P0L9	805 aa		13.81	□□□□□ -0.2
DDX11-223	ENST00000542838	LOXHD1	Q8IVV2	1947 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms