RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TMEM117Q9H0C3 514 aa14.41□□□□□ -0.1
CHFR-221ENST00000542714 INTS2Q9H0H0 1204 aaKnown RBP14.41□□□□□ -0.1
CHFR-221ENST00000542714 PLCB1Q9NQ66 1216 aa14.41□□□□□ -0.1
CHFR-221ENST00000542714 RBAKQ9NYW8 714 aaPredicted RBP14.41□□□□□ -0.1
CHFR-221ENST00000542714 GCNT4Q9P109 453 aa14.41□□□□□ -0.1
CHFR-221ENST00000542714 AJAP1Q9UKB5 411 aaPredicted RBP14.41□□□□□ -0.1
CHFR-221ENST00000542714 GINS2Q9Y248 185 aa14.41□□□□□ -0.1
CHFR-221ENST00000542714 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 P4HA2O15460 535 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 MEFVO15553 781 aaPredicted RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 N4BP1O75113 896 aaKnown RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 ERLIN2O94905 339 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 TPM1P09493 284 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 MCF2P10911 925 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 SKILP12757 684 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 EIF4BP23588 611 aaKnown RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 HOXA11P31270 313 aaPredicted RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 KRT9P35527 623 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 ZBED6P86452 979 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 HSP90AA2PQ14568 343 aaPredicted RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 PTGISQ16647 500 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 TMEM132AQ24JP5 1023 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 TRIM71Q2Q1W2 868 aaKnown RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 KLHDC7AQ5VTJ3 777 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 C15orf39Q6ZRI6 1047 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 CATSPER4Q7RTX7 472 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 TMEM192Q8IY95 271 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 ARRDC4Q8NCT1 418 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 PDE11AQ9HCR9 933 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 TRMT13Q9NUP7 481 aaKnown RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 CEP72Q9P209 647 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 LUC7L2Q9Y383 392 aaKnown RBP14.4□□□□□ -0.1
CHFR-221ENST00000542714 TRPV2Q9Y5S1 764 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 CDY2AQ9Y6F7 541 aa14.4□□□□□ -0.1
CHFR-221ENST00000542714 STX10O60499 249 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 LRRN2O75325 713 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 MYCP01106 439 aaPredicted RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 CHRNA1P02708 482 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 GTF2H1P32780 548 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 MXI1P50539 228 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 ENOX2Q16206 610 aaKnown RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 E4F1Q66K89 784 aaPredicted RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 LMBRD2Q68DH5 695 aaPredicted RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 PDXDC1Q6P996 788 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 GJB7Q6PEY0 223 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 TRIM65Q6PJ69 517 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 WDR59Q6PJI9 974 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 CTU1Q7Z7A3 348 aaKnown RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 THNSL1Q8IYQ7 743 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 ZNF710Q8N1W2 664 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 EHBP1Q8NDI1 1231 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 CCDC112Q8NEF3 446 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 VTI1AQ96AJ9 217 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 GLT1D1Q96MS3 346 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 DEFB118Q96PH6 123 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 CGRRF1Q99675 332 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 BAG1Q99933 345 aaPredicted RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 SENP6Q9GZR1 1112 aaPredicted RBP14.39□□□□□ -0.11
CHFR-221ENST00000542714 TMEM8AQ9HCN3 771 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 OGDHLQ9ULD0 1010 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 COQ4Q9Y3A0 265 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 FHOD1Q9Y613 1164 aa14.39□□□□□ -0.11
CHFR-221ENST00000542714 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 ESPNB1AK53 854 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 KBTBD13C9JR72 458 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 DNM1LO00429 736 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 C4BPAP04003 597 aaKnown RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 CTSHP09668 335 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 DLATP10515 647 aaKnown RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 POLR2FP61218 127 aaKnown RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 PTK7Q13308 1070 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 PCBP1Q15365 356 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHFR-221ENST00000542714 FAM228AQ86W67 206 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 C17orf53Q8N3J3 647 aaPredicted RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 OR8K1Q8NGG5 319 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 SEMA4DQ92854 862 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 NAA15Q9BXJ9 866 aaKnown RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 OSBPL7Q9BZF2 842 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 NLRC4Q9NPP4 1024 aa14.38□□□□□ -0.11
CHFR-221ENST00000542714 NOC2LQ9Y3T9 749 aaKnown RBP14.38□□□□□ -0.11
CHFR-221ENST00000542714 LRRC53A6NM62 1247 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 NPTXRO95502 500 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 UCHL3P15374 230 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 AXLP30530 894 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 HNRNPH3P31942 346 aaKnown RBP14.37□□□□□ -0.11
CHFR-221ENST00000542714 OSTNP61366 133 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 MEA1Q16626 185 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 DCAF4L1Q3SXM0 396 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 UBXN11Q5T124 520 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 TDRD10Q5VZ19 366 aaKnown RBP14.37□□□□□ -0.11
CHFR-221ENST00000542714 KRT39Q6A163 491 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 IQCEQ6IPM2 695 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 SV2AQ7L0J3 742 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 USP37Q86T82 979 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 RSPH3Q86UC2 560 aa14.37□□□□□ -0.11
CHFR-221ENST00000542714 OR5B17Q8NGF7 314 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms