RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 GOLGA8IPA6NC78 632 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 GOLGA8JA6NMD2 632 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 NFKBIEO00221 500 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 KIAA0391O15091 583 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PPFIA2O75334 1257 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 MYZAPP0CAP1 466 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CYP11B1P15538 503 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 DSG3P32926 999 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CTNNA1P35221 906 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 BAG6P46379 1132 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PEX5P50542 639 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PRPF4BQ13523 1007 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CEP85LQ5SZL2 805 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 AGBL2Q5U5Z8 902 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SNRNP48Q6IEG0 339 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 GPD1LQ8N335 351 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SH2D3CQ8N5H7 860 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF564Q8TBZ8 553 aaPredicted RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 WNK4Q96J92 1243 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ERP44Q9BS26 406 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ATP6V0A4Q9HBG4 840 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 KIAA1586Q9HCI6 787 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ARHGAP28Q9P2N2 729 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PCYOX1Q9UHG3 505 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RSPH14Q9UHP6 348 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PPME1Q9Y570 386 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ATXN2Q99700 1313 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 LCTP09848 1927 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 C19orf81C9J6K1 198 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CYP26A1O43174 497 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RGS20O76081 388 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PTPRAP18433 802 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 EIF3BP55884 814 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CLDN10P78369 228 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF844Q08AG5 666 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CYP1B1Q16678 543 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 GNPTABQ3T906 1256 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 NBPF12Q5TAG4 269 aaPredicted RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SEL1L2Q5TEA6 688 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 KCTD16Q68DU8 428 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 C15orf39Q6ZRI6 1047 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SLC47A2Q86VL8 602 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 MICALL2Q8IY33 904 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 BCAS4Q8TDM0 211 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 DDX1Q92499 740 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SAAL1Q96ER3 474 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 FMO2Q99518 471 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 KIFC3Q9BVG8 833 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CELF4Q9BZC1 486 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 FAM129AQ9BZQ8 928 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ERVK-5Q9HDB9 667 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 XPNPEP1Q9NQW7 623 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PICK1Q9NRD5 415 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZDHHC18Q9NUE0 388 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 TMOD4Q9NZQ9 345 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SLC9A2Q9UBY0 812 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SCAF8Q9UPN6 1271 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 TRPC6Q9Y210 931 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 NR2E1Q9Y466 385 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ADGRA3Q8IWK6 1321 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PODXLO00592 558 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 HNRNPDLO14979 420 aaKnown RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ERLIN2O94905 339 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 MMEP08473 750 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 COMTP21964 271 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 USP8P40818 1118 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 GMPSP49915 693 aaPredicted RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 CORO7P57737 925 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PRKCEQ02156 737 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PDCLQ13371 301 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ABHD15Q6UXT9 468 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 SV2AQ7L0J3 742 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF677Q86XU0 584 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 JAMLQ86YT9 394 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 APOBEC3FQ8IUX4 373 aaKnown RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 TAS1R2Q8TE23 839 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 POMGNT1Q8WZA1 660 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 DHX38Q92620 1227 aaKnown RBP7.03□□□□□ -1.28
PTPRO-208ENST00000542557 KRT35Q92764 455 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 CCDC127Q96BQ5 260 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 IFT74Q96LB3 600 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 TRIM51Q9BSJ1 452 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PAGR1Q9BTK6 254 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 TEX13BQ9BXU2 312 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 ACAD9Q9H845 621 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 CYP26B1Q9NR63 512 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 CYP39A1Q9NYL5 469 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 LCMT1Q9UIC8 334 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 BCS1LQ9Y276 419 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 WDR90Q96KV7 1748 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 A0A0G2JMZ2 1700 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 SPATA31C2B4DYI2 1134 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 MYO1FO00160 1098 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 EXTL3O43909 919 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PIGRP01833 764 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 NUDT17P0C025 328 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 FLT3P36888 993 aa7.03□□□□□ -1.28
PTPRO-208ENST00000542557 PTGIRP43119 386 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms