RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CXCL16Q9H2A7 254 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 STK39Q9UEW8 545 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 IRAK3Q9Y616 596 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 TRIP11Q15643 1979 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 C2orf71A6NGG8 1288 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 MYMKA6NI61 221 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 PER2O15055 1255 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 TOM1L1O75674 476 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 FAM13AO94988 1023 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 KRT18P05783 430 aaKnown RBP16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 CTSAP10619 480 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 MCF2P10911 925 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 GRM5P41594 1212 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 STRN3Q13033 797 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 FOXD4L6Q3SYB3 417 aaPredicted RBP16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 MPZL3Q6UWV2 235 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 FOXD4L3Q6VB84 417 aaPredicted RBP16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 SV2BQ7L1I2 683 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 VN1R2Q8NFZ6 395 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 DNAJC19Q96DA6 116 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 MSLNLQ96KJ4 702 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 CLEC1BQ9P126 229 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
ECHDC2-223ENST00000542552 GRXCR2A6NFK2 248 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 TRAK2O60296 914 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 CXCL14O95715 111 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 STAT6P42226 847 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 OR1G1P47890 313 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 DNM1Q05193 864 aaKnown RBP16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 E2F4Q16254 413 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 PUS10Q3MIT2 529 aaKnown RBP16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 ZNF568Q3ZCX4 644 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 SHC4Q6S5L8 630 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 ALKAL1Q6UXT8 129 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 TMEM184AQ6ZMB5 413 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 RNF168Q8IYW5 571 aaPredicted RBP16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 CEP120Q8N960 986 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 DDX12PQ92771 950 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 ZBTB45Q96K62 511 aaPredicted RBP16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 RPS6KC1Q96S38 1066 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 ST6GALNAC4Q9H4F1 302 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 CFAP45Q9UL16 551 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 TBX20Q9UMR3 447 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 GDAQ9Y2T3 454 aa16.94■□□□□ 0.3
ECHDC2-223ENST00000542552 F8W810 466 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 LILRB3O75022 631 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 TBCAO75347 108 aaKnown RBP16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 PIGRP01833 764 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 THP07101 528 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 GTF2BQ00403 316 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 MCL1Q07820 350 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 TUSC3Q13454 348 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 PTCRAQ6ISU1 281 aaPredicted RBP16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 DYMQ7RTS9 669 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 ZBTB33Q86T24 672 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 TCHPQ9BT92 498 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 COLEC11Q9BWP8 271 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 HAPLN2Q9GZV7 340 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 PCDHA7Q9UN72 937 aa16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 PRG3Q9Y2Y8 225 aaPredicted RBP16.93■□□□□ 0.3
ECHDC2-223ENST00000542552 CITO14578 2027 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 K7ENM7 598 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 MEFVO15553 781 aaPredicted RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 NR1I2O75469 434 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 SOD2P04179 222 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 NMT1P30419 496 aaKnown RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 ABCD1P33897 745 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 NDUFV1P49821 464 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 RBM10P98175 930 aaKnown RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 COASYQ13057 564 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 BMS1Q14692 1282 aaKnown RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 TAS1R1Q7RTX1 841 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 FAM178BQ8IXR5 827 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 PDILTQ8N807 584 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 AUTS2Q8WXX7 1259 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 PPP1R10Q96QC0 940 aaKnown RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 UHRF1Q96T88 793 aaPredicted RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 PAAF1Q9BRP4 392 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 CCDC94Q9BW85 323 aaPredicted RBP16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 STRA6Q9BX79 667 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 KBTBD4Q9NVX7 518 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 SEL1LQ9UBV2 794 aa16.92■□□□□ 0.3
ECHDC2-223ENST00000542552 SMIM28A0A1B0GU29 152 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 FRMD3A2A2Y4 597 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 CLDN3O15551 220 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 CLASP2O75122 1294 aaKnown RBP16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 GAP43P17677 238 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 BECN1Q14457 450 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 HSP90AA2PQ14568 343 aaPredicted RBP16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 KIAA0319Q5VV43 1072 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 ZNF720Q7Z2F6 126 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 NECAB3Q96P71 396 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms