RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDH3-203ENST00000542274 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 LONP2Q86WA8 852 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 IFT81Q8WYA0 676 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 CATSPER2Q96P56 530 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 NUP88Q99567 741 aaPredicted RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 KRT82Q9NSB4 513 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 CTNNAL1Q9UBT7 734 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 RIMKLBQ9ULI2 386 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 EXOC7Q9UPT5 735 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 GREB1LQ9C091 1923 aaPredicted RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 MAGEB3O15480 346 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 TUBBP07437 444 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 GLI1P08151 1106 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 UBA7P41226 1012 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 TXKP42681 527 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 GPC3P51654 580 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 ARL6IP4Q66PJ3 421 aaKnown RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 SPICE1Q8N0Z3 855 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 REXO1Q8N1G1 1221 aaKnown RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 COG1Q8WTW3 980 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 HAUS1Q96CS2 278 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 ANKRD27Q96NW4 1050 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 NDST4Q9H3R1 872 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 XPO7Q9UIA9 1087 aaKnown RBP11.86□□□□□ -0.51
CDH3-203ENST00000542274 IVNS1ABPQ9Y6Y0 642 aa11.86□□□□□ -0.51
CDH3-203ENST00000542274 ASTN2O75129 1339 aaPredicted RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 AKR1B15C9JRZ8 316 aaPredicted RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 PAHP00439 452 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 PLCG1P19174 1290 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 PRCPP42785 496 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 CCNG1P51959 295 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 HPCAP84074 193 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 LSAMPQ13449 338 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 BYSLQ13895 437 aaKnown RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 MTF1Q14872 753 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 DGLUCYQ7Z3D6 616 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 KRT77Q7Z794 578 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 NEK8Q86SG6 692 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 NLRP14Q86W24 1093 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 TMEM139Q8IV31 216 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 DACH1Q9UI36 760 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 ACAD8Q9UKU7 415 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 ARFGEF1Q9Y6D6 1849 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 A0A0U1RQJ8 604 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 CDK2AP1O14519 115 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 NKRFO15226 690 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH3-203ENST00000542274 ASLP04424 464 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 SNHG28P0DPA3 235 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 SERPINB4P48594 390 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 TNNI2P48788 182 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 ITGB3BPQ13352 177 aaPredicted RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 STK11Q15831 433 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 ARHGEF18Q6ZSZ5 1173 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 LURAP1LQ8IV03 231 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 CYP4X1Q8N118 509 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 NCSTNQ92542 709 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 PTPRN2Q92932 1015 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 SNX25Q9H3E2 840 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 PARVBQ9HBI1 364 aa11.85□□□□□ -0.51
CDH3-203ENST00000542274 TTC7AQ9ULT0 858 aaPredicted RBP11.85□□□□□ -0.51
CDH3-203ENST00000542274 GOLGA8IPA6NC78 632 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 POTEMA6NI47 508 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 RASA4BC9J798 803 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 WNT10BO00744 389 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
CDH3-203ENST00000542274 ACSL4O60488 711 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 OR52Z1P0C646 297 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
CDH3-203ENST00000542274 ADARP55265 1226 aaKnown RBP11.84□□□□□ -0.51
CDH3-203ENST00000542274 NR1I3Q14994 352 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 MIGA2Q7L4E1 593 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 SIAH1Q8IUQ4 282 aa11.84□□□□□ -0.51
CDH3-203ENST00000542274 DESI2Q9BSY9 194 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms