RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 AGAP11Q8TF27 550 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 BICD1Q96G01 975 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 TRIM7Q9C029 511 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 NSRP1Q9H0G5 558 aaKnown RBP16.42■□□□□ 0.22
CNOT9-208ENST00000542068 KCNH7Q9NS40 1196 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 NCANO14594 1321 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 TBX3O15119 743 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 DIAPH2O60879 1101 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 CHRNA3P32297 505 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 COILP38432 576 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 C1orf186Q6ZWK4 172 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 SRRM1Q8IYB3 904 aaKnown RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 LARSQ9P2J5 1176 aaKnown RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 PFASO15067 1338 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 ANP32DO95626 131 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 NUDT17P0C025 328 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 SLC8A1P32418 973 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 ALDH5A1P51649 535 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 CETN1Q12798 172 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 C3orf20Q8ND61 904 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 GMCL1P1Q8NEA9 526 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 DHX38Q92620 1227 aaKnown RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 PGM2Q96G03 612 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 HSD17B14Q9BPX1 270 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 A1CFQ9NQ94 594 aaKnown RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 CEP83Q9Y592 693 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 BHMG1C9JSJ3 638 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 MGRN1O60291 552 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 DNAJC8O75937 253 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 AGTP01019 485 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 KRT5P13647 590 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 GAP43P17677 238 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 KRT17Q04695 432 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
CNOT9-208ENST00000542068 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
CNOT9-208ENST00000542068 SYNGAP1Q96PV0 1343 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 ECEL1O95672 775 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 NOP9Q86U38 636 aaKnown RBP16.4■□□□□ 0.22
CNOT9-208ENST00000542068 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 ENTPD3O75355 529 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 ITGB5P18084 799 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
CNOT9-208ENST00000542068 WLSQ5T9L3 541 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 TAOK1Q7L7X3 1001 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 SLC13A5Q86YT5 568 aaPredicted RBP16.4■□□□□ 0.22
CNOT9-208ENST00000542068 RHOT2Q8IXI1 618 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 FAM167BQ9BTA0 163 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
CNOT9-208ENST00000542068 THAP12O43422 761 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 BRAFP15056 766 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 TMX2Q9Y320 296 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 SNX3O60493 162 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 SPAG7O75391 227 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 PSMD10O75832 226 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 STX2P32856 288 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 ADCY8P40145 1251 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 MTMR1Q13613 665 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 BMT2Q1RMZ1 405 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 MIEF2Q96C03 454 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 HOMER3Q9NSC5 361 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 GTPBP10A4D1E9 387 aaKnown RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 ASAP2O43150 1006 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 KRT16P08779 473 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 PDE6CP51160 858 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 VAMP7P51809 220 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 MTM1Q13496 603 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 TAB3Q8N5C8 712 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 RSRC1Q96IZ7 334 aaKnown RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 OLFML3Q9NRN5 406 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 TOPORSQ9NS56 1045 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 TTC7AQ9ULT0 858 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 USTQ9Y2C2 406 aa16.39■□□□□ 0.21
CNOT9-208ENST00000542068 USP15Q9Y4E8 981 aaPredicted RBP16.39■□□□□ 0.21
CNOT9-208ENST00000542068 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 PODXLO00592 558 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 PEX19P40855 299 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 MPP2Q14168 576 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 RASA3Q14644 834 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 CYP4X1Q8N118 509 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 AKT1S1Q96B36 256 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 COL20A1Q9P218 1284 aa16.38■□□□□ 0.21
CNOT9-208ENST00000542068 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
CNOT9-208ENST00000542068 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNOT9-208ENST00000542068 ZHX2Q9Y6X8 837 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms