RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 BRF1Q92994 677 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 JPH2Q9BR39 696 aaPredicted RBP13.16□□□□□ -0.3
COPA-205ENST00000541366 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 FRYQ5TBA9 3013 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 SDK1Q7Z5N4 2213 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CYP3A7-CYP3A51PA0A087WV96 503 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CCDC196A0A1B0GTZ2 297 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 SLC37A4O43826 429 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 NR1I2O75469 434 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 TADA2AO75478 443 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 C1RP00736 705 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CYP3A7P24462 503 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
COPA-205ENST00000541366 RCAN1P53805 252 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 NLRP5P59047 1200 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 FGD1P98174 961 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.3
COPA-205ENST00000541366 EMC2Q15006 297 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 Q6ZUG5 572 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
COPA-205ENST00000541366 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
COPA-205ENST00000541366 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
COPA-205ENST00000541366 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 B4GALT5O43286 388 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 NPTXRO95502 500 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 TDGF1P13385 188 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 IGFBP6P24592 240 aaPredicted RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 PTENP60484 403 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 PFKPQ01813 784 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 PSMD5Q16401 504 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 AMHR2Q16671 573 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 GPR65Q8IYL9 337 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 LNX1Q8TBB1 728 aaPredicted RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 MCRS1Q96EZ8 462 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 BORCS6Q96GS4 357 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 XPNPEP1Q9NQW7 623 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 RGL1Q9NZL6 768 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 NDRG2Q9UN36 371 aaKnown RBP13.14□□□□□ -0.31
COPA-205ENST00000541366 GIT1Q9Y2X7 761 aa13.14□□□□□ -0.31
COPA-205ENST00000541366 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 ATRXP46100 2492 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 SLC30A4O14863 429 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 GDF9O60383 454 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 KIF4AO95239 1232 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
COPA-205ENST00000541366 MAGEA9P43362 315 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 CREMQ03060 361 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 GRIK3Q13003 919 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 INF2Q27J81 1249 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 FAM171A1Q5VUB5 890 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 TANGO2Q6ICL3 276 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 TRIM6Q9C030 488 aaPredicted RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 PARP2Q9UGN5 583 aa13.13□□□□□ -0.31
COPA-205ENST00000541366 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
COPA-205ENST00000541366 NID2Q14112 1375 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 ARID2Q68CP9 1835 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 XYLBO75191 536 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 AXLP30530 894 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
COPA-205ENST00000541366 RFC5P40937 340 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 ADCY1Q08828 1119 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 PPP2R5CQ13362 524 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
COPA-205ENST00000541366 GRM2Q14416 872 aa13.12□□□□□ -0.31
COPA-205ENST00000541366 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms