RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RGS12O14924 1447 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 PEX1O43933 1283 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 A1BGP04217 495 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 PHKA2P46019 1235 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 CCDC60Q8IWA6 550 aaPredicted RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 SPON2Q9BUD6 331 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 VIPAS39Q9H9C1 493 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 SYNCRIPO60506 623 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ALBP02768 609 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 TRIM49P0CI25 452 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 TRIM49CP0CI26 452 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ALFQ53S48 1182 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ARMC6Q6NXE6 501 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 SMAD5Q99717 465 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 PRMT1Q99873 361 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 C20orf96Q9NUD7 363 aaPredicted RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 GTF2A1LQ9UNN4 478 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 EVPLLA8MZ36 301 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 FAM47E-STBD1D6RA91 191 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ALDH1A1P00352 501 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 CCNE1P24864 410 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 BCAMP50895 628 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ZNF564Q8TBZ8 553 aaPredicted RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 PDCD10Q9BUL8 212 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 CYBBP04839 570 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 VEPH1Q14D04 833 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ZNF394Q53GI3 561 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 TWF2Q6IBS0 349 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 SLC9A2Q9UBY0 812 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ZC3H4Q9UPT8 1303 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 M0QYV0 167 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 USP1O94782 785 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 AKT1P31749 480 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 KRT76Q01546 638 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 FAM45AQ8TCE6 357 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 CALML6Q8TD86 181 aa16.17■□□□□ 0.18
HMGA2-210ENST00000541363 MAP3K20Q9NYL2 800 aaKnown RBP16.17■□□□□ 0.18
HMGA2-210ENST00000541363 CUL7Q14999 1698 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 CLASP2O75122 1294 aaKnown RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 TMEM270Q6UE05 265 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 C11orf74Q86VG3 221 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 FAM49AQ9H0Q0 323 aaPredicted RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 PLA2G4AP47712 749 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 ANKS6Q68DC2 871 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 CC2D1AQ6P1N0 951 aaPredicted RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 VPS37AQ8NEZ2 397 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 IARS2Q9NSE4 1012 aaKnown RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 UBAP1Q9NZ09 502 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 ZFATQ9P243 1243 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 SRPRBQ9Y5M8 271 aaKnown RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 TCP11X1B4DZS4 312 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 TRIM24O15164 1050 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 ZNF544Q6NX49 715 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 NEK10Q6ZWH5 1172 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 TTC39CQ8N584 583 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 KIFC1Q9BW19 673 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 COG2Q14746 738 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 RASGRP4Q8TDF6 673 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 ERAP1Q9NZ08 941 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 MORC2Q9Y6X9 1032 aaPredicted RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 RPRD2Q5VT52 1461 aaKnown RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 SAC3D1A6NKF1 404 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 APBA3O96018 575 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 ATP12AP54707 1039 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 NFX1Q12986 1120 aaKnown RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 RNASE11Q8TAA1 199 aaKnown RBP16.16■□□□□ 0.18
HMGA2-210ENST00000541363 RAD21L1Q9H4I0 556 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 GDAQ9Y2T3 454 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 ADGRA2Q96PE1 1338 aa16.16■□□□□ 0.18
HMGA2-210ENST00000541363 AK9Q5TCS8 1911 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 A0A0D9SFI3 127 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ATP9BO43861 1147 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 GNA15P30679 374 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 TALDO1P37837 337 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ZNF568Q3ZCX4 644 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ELMO2Q96JJ3 720 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 CD274Q9NZQ7 290 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ADAM21Q9UKJ8 722 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 MYL2P10916 166 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 DARSP14868 501 aaKnown RBP16.15■□□□□ 0.18
HMGA2-210ENST00000541363 HSPA13P48723 471 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 HSD17B4P51659 736 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ST8SIA6P61647 398 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 SAMSN1Q9NSI8 373 aaKnown RBP16.15■□□□□ 0.18
HMGA2-210ENST00000541363 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 TNPO2O14787 897 aaKnown RBP16.15■□□□□ 0.18
HMGA2-210ENST00000541363 FOXP2O15409 715 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 KLHL2O95198 593 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 BCAR1P56945 870 aa16.15■□□□□ 0.18
HMGA2-210ENST00000541363 CUL4AQ13619 759 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms