RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 LRRC19Q9H756 370 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 ACTR5Q9H9F9 607 aaPredicted RBP10.25□□□□□ -0.77
CNOT4-212ENST00000541284 KLC4Q9NSK0 619 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 SLC12A4Q9UP95 1085 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 MRPL11Q9Y3B7 192 aaKnown RBP10.25□□□□□ -0.77
CNOT4-212ENST00000541284 GOLGA6L10A0A0M3HER8 536 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 GHRP10912 638 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 CLUL1Q15846 466 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 NIPA1Q7RTP0 329 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 LRRC34Q8IZ02 419 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 RTKN2Q8IZC4 609 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 XXYLT1Q8NBI6 393 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 KCNN1Q92952 543 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 ACCSQ96QU6 501 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 TRIM7Q9C029 511 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 KDM4CQ9H3R0 1056 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 TMEM206Q9H813 350 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 ARHGEF10LQ9HCE6 1279 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 SEPT11Q9NVA2 429 aaKnown RBP10.25□□□□□ -0.77
CNOT4-212ENST00000541284 TMEM110-MUSTN1A8MSY1 372 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 G3V3G9 751 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 FZD9O00144 591 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 FSCN2O14926 492 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ASAP2O43150 1006 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 RARGP13631 454 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CYP11B1P15538 503 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CAP2P40123 477 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CNGA2Q16280 664 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 TKFCQ3LXA3 575 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 DCAF8Q5TAQ9 597 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ARMC9Q7Z3E5 817 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 HAUS6Q7Z4H7 955 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 HOOK3Q86VS8 718 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CACNA2D3Q8IZS8 1091 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 FBXL18Q96ME1 805 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 NUP85Q9BW27 656 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 TOPORSQ9NS56 1045 aaPredicted RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 HAUS2Q9NVX0 235 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 GTF3C4Q9UKN8 822 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ADAMTS5Q9UNA0 930 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 TCP10L2B9ZVM9 353 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 DNAJC8O75937 253 aaPredicted RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 STBD1O95210 358 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CCNE2O96020 404 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 AGTP01019 485 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CREB1P16220 341 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CHKAP35790 457 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 GPC3P51654 580 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ALCAMQ13740 583 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 DENND2CQ68D51 928 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 VSTM1Q6UX27 236 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 EXOC3L1Q86VI1 746 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 SYCP3Q8IZU3 236 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF564Q8TBZ8 553 aaPredicted RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 MORC4Q8TE76 937 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 BSNDQ8WZ55 320 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 DHX38Q92620 1227 aaKnown RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 DDX23Q9BUQ8 820 aaKnown RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 GOPCQ9HD26 462 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.779e-8■■■■■ 77
CNOT4-212ENST00000541284 GOLGA8IPA6NC78 632 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 GOLGA8JA6NMD2 632 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 PODXLO00592 558 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CTNND1O60716 968 aaKnown RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 KRT13P13646 458 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 MXI1P50539 228 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ODF2Q5BJF6 829 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 CYFIP1Q7L576 1253 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 UBL4BQ8N7F7 174 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 TMEM161BQ8NDZ6 487 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 PARD3BQ8TEW8 1205 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF622Q969S3 477 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■□□□□ 10.1
CNOT4-212ENST00000541284 FAM84AQ96KN4 292 aa10.24□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF70Q9UC06 446 aaPredicted RBP10.24□□□□□ -0.77
CNOT4-212ENST00000541284 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 ICAM1P05362 532 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CDR2Q01850 454 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 IFFO1Q0D2I5 559 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CYB5D1Q6P9G0 228 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CCDC121Q6ZUS5 278 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MIGA2Q7L4E1 593 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MIER3Q7Z3K6 550 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 ANKS1BQ7Z6G8 1248 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 REPS2Q8NFH8 660 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CLRN2A0PK11 232 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CCT8L1PA6NM43 557 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 FOXO6A8MYZ6 492 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 SLC16A4O15374 487 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 ATP9AO75110 1047 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 UNGP13051 313 aaPredicted RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 DPEP1P16444 411 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MPP2Q14168 576 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 TBC1D10BQ4KMP7 808 aaPredicted RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 WLSQ5T9L3 541 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms