RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 KBTBD4Q9NVX7 518 aa18.52■□□□□ 0.56
CD9-209ENST00000540891 FAN1Q9Y2M0 1017 aa18.52■□□□□ 0.56
CD9-209ENST00000540891 PRG3Q9Y2Y8 225 aaPredicted RBP18.52■□□□□ 0.56
CD9-209ENST00000540891 HIDE1A8MVS5 230 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 LINC01565O15544 149 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 MEFVO15553 781 aaPredicted RBP18.51■□□□□ 0.55
CD9-209ENST00000540891 EFEMP2O95967 443 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 PIGRP01833 764 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 OR1G1P47890 313 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 NRIP1P48552 1158 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 KCNQ1P51787 676 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 ZC2HC1CQ53FD0 456 aaPredicted RBP18.51■□□□□ 0.55
CD9-209ENST00000540891 PDE12Q6L8Q7 609 aaKnown RBP18.51■□□□□ 0.55
CD9-209ENST00000540891 RBM23Q86U06 439 aaKnown RBP18.51■□□□□ 0.55
CD9-209ENST00000540891 RPS6KC1Q96S38 1066 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 STRA6Q9BX79 667 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 ZBP1Q9H171 429 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 TNMDQ9H2S6 317 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 IGFLR1Q9H665 355 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 ENTPD7Q9NQZ7 604 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 CACNG4Q9UBN1 327 aa18.51■□□□□ 0.55
CD9-209ENST00000540891 TDRD15B5MCY1 1934 aaKnown RBP18.51■□□□□ 0.55
CD9-209ENST00000540891 PER2O15055 1255 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 POLR2DO15514 142 aaKnown RBP18.5■□□□□ 0.55
CD9-209ENST00000540891 PPP1R37O75864 691 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 HARSP12081 509 aaKnown RBP18.5■□□□□ 0.55
CD9-209ENST00000540891 SCP2P22307 547 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 KCNA5P22460 613 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 OSTNP61366 133 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 DLX2Q07687 328 aaPredicted RBP18.5■□□□□ 0.55
CD9-209ENST00000540891 MCL1Q07820 350 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 NOLC1Q14978 699 aaKnown RBP eCLIP18.5■□□□□ 0.55
CD9-209ENST00000540891 DUSP6Q16828 381 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 XKR4Q5GH76 650 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 TJAP1Q5JTD0 557 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 SLC39A4Q6P5W5 647 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 ALKAL1Q6UXT8 129 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 ZNF720Q7Z2F6 126 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 TMC7Q7Z402 723 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 APBB1IPQ7Z5R6 666 aaPredicted RBP18.5■□□□□ 0.55
CD9-209ENST00000540891 MAP4K3Q8IVH8 894 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 RNF168Q8IYW5 571 aaPredicted RBP18.5■□□□□ 0.55
CD9-209ENST00000540891 VPS52Q8N1B4 723 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 IQUBQ8NA54 791 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 SPATA32Q96LK8 384 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 PAAF1Q9BRP4 392 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 TCHPQ9BT92 498 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 CUEDC2Q9H467 287 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 NGRNQ9NPE2 291 aaKnown RBP18.5■□□□□ 0.55
CD9-209ENST00000540891 CLDND1Q9NY35 253 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 ANKFY1Q9P2R3 1169 aa18.5■□□□□ 0.55
CD9-209ENST00000540891 VCANP13611 3396 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 BRWD1Q9NSI6 2320 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 C2orf71A6NGG8 1288 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 NCK2O43639 380 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 TBX10O75333 385 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 GLP2RO95838 553 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 CTSAP10619 480 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 BMP1P13497 986 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 GAP43P17677 238 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 ADAM15Q13444 863 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 TUSC3Q13454 348 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 SEZ6Q53EL9 994 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 GLRA4Q5JXX5 417 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 EFHBQ8N7U6 833 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 MRPL43Q8N983 215 aaKnown RBP18.49■□□□□ 0.55
CD9-209ENST00000540891 RABGGTAQ92696 567 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 PPP2R3CQ969Q6 453 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 SNX27Q96L92 541 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 PPP1R10Q96QC0 940 aaKnown RBP18.49■□□□□ 0.55
CD9-209ENST00000540891 CCDC94Q9BW85 323 aaPredicted RBP18.49■□□□□ 0.55
CD9-209ENST00000540891 FGFBP2Q9BYJ0 223 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 TRIM9Q9C026 710 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 TLE6Q9H808 572 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 FAM13BQ9NYF5 915 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 SEL1LQ9UBV2 794 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 ATP6V1DQ9Y5K8 247 aa18.49■□□□□ 0.55
CD9-209ENST00000540891 CASTOR2A6NHX0 329 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 H3BQ06 376 aaPredicted RBP18.48■□□□□ 0.55
CD9-209ENST00000540891 HNRNPDLO14979 420 aaKnown RBP18.48■□□□□ 0.55
CD9-209ENST00000540891 CLDN3O15551 220 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 FAM189A1O60320 539 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 THP07101 528 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 IDEP14735 1019 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 LIG4P49917 911 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 CASP5P51878 434 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 RBM10P98175 930 aaKnown RBP18.48■□□□□ 0.55
CD9-209ENST00000540891 KCNC3Q14003 757 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 SMC1AQ14683 1233 aaKnown RBP18.48■□□□□ 0.55
CD9-209ENST00000540891 LEXMQ3ZCV2 418 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 ADALQ6DHV7 355 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 VN1R2Q8NFZ6 395 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.48■□□□□ 0.55
CD9-209ENST00000540891 AUTS2Q8WXX7 1259 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 BICD1Q96G01 975 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 ZMAT2Q96NC0 199 aaKnown RBP18.48■□□□□ 0.55
CD9-209ENST00000540891 IKZF4Q9H2S9 585 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 OLFML3Q9NRN5 406 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 PANK4Q9NVE7 773 aa18.48■□□□□ 0.55
CD9-209ENST00000540891 TBC1D7Q9P0N9 293 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms