RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
YBX3-209ENST00000540747 ZC3H14Q6PJT7 736 aaKnown RBP8.13□□□□□ -1.11
YBX3-209ENST00000540747 POTEHQ6S545 545 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 PARM1Q6UWI2 310 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 PPP4R3CPQ6ZMV5 832 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 GET4Q7L5D6 327 aaPredicted RBP8.13□□□□□ -1.11
YBX3-209ENST00000540747 NEK8Q86SG6 692 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 PALB2Q86YC2 1186 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 ZNF687Q8N1G0 1237 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 DCLK2Q8N568 766 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 TNFRSF25Q93038 417 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 ZNF274Q96GC6 653 aaPredicted RBP8.13□□□□□ -1.11
YBX3-209ENST00000540747 DYDC2Q96IM9 177 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 MTRQ99707 1265 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 HSD17B14Q9BPX1 270 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 CLSTN3Q9BQT9 956 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 PAAF1Q9BRP4 392 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 COLEC11Q9BWP8 271 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 OSBPL6Q9BZF3 934 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 ZSWIM4Q9H7M6 989 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 BMP2KQ9NSY1 1161 aaPredicted RBP8.13□□□□□ -1.11
YBX3-209ENST00000540747 CACNG4Q9UBN1 327 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 FBXO4Q9UKT5 387 aa8.13□□□□□ -1.11
YBX3-209ENST00000540747 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
YBX3-209ENST00000540747 SF3B1O75533 1304 aaKnown RBP eCLIP8.12□□□□□ -1.11
YBX3-209ENST00000540747 TDRD15B5MCY1 1934 aaKnown RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 MYH15Q9Y2K3 1946 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 KANSL1LA0AUZ9 987 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 PTGESO14684 152 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 SPTLC1O15269 473 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 ADAM12O43184 909 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 TGM1P22735 817 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 FSHRP23945 695 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 AKAP5P24588 427 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 PSMA5P28066 241 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 PRKCQQ04759 706 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 FZD5Q13467 585 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 CTTNQ14247 550 aaKnown RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 HSP90AA2PQ14568 343 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 MLF2Q15773 248 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 XKR9Q5GH70 373 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 SPECC1Q5M775 1068 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 CDCA2Q69YH5 1023 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 SLC27A1Q6PCB7 646 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 PRSS55Q6UWB4 352 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 RSPO2Q6UXX9 243 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 RUFY3Q7L099 469 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 CENPQQ7L2Z9 268 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 OTUD6AQ7L8S5 288 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 GRASPQ7Z6J2 395 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 POTEDQ86YR6 584 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 ZBTB44Q8NCP5 570 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 ST13P5Q8NFI4 369 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 LNX1Q8TBB1 728 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 KCNG4Q8TDN1 519 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 OXER1Q8TDS5 423 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 RABGGTAQ92696 567 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 FGF13Q92913 245 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 CLDN23Q96B33 292 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 BORCS6Q96GS4 357 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 CXCL16Q9H2A7 254 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 PRMT8Q9NR22 394 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 KCNJ14Q9UNX9 436 aa8.12□□□□□ -1.11
YBX3-209ENST00000540747 MTF2Q9Y483 593 aaPredicted RBP8.12□□□□□ -1.11
YBX3-209ENST00000540747 VWA8A3KMH1 1905 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 STK36Q9NRP7 1315 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 CNOT1A5YKK6 2376 aaKnown RBP8.11□□□□□ -1.11
YBX3-209ENST00000540747 FAM205CA6NFA0 338 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 TTLL13PA6NNM8 815 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 INO80B-WBP1J3KQ70 363 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 STK25O00506 426 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 EPB41L2O43491 1005 aaKnown RBP8.11□□□□□ -1.11
YBX3-209ENST00000540747 NR1I2O75469 434 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 DGAT1O75907 488 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 KIF4AO95239 1232 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 NPTXRO95502 500 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 TDGF1P13385 188 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 MAGEA9P43362 315 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 RARRES1P49788 294 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 CYP4A11Q02928 519 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 TUSC3Q13454 348 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 RAB33AQ14088 237 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 TFDP1Q14186 410 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 FAM187BQ17R55 369 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 NCAPH2Q6IBW4 605 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 CD300LGQ6UXG3 332 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 MTSS1LQ765P7 747 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 CDR2LQ86X02 465 aaPredicted RBP8.11□□□□□ -1.11
YBX3-209ENST00000540747 GLYCTKQ8IVS8 523 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 NPAS3Q8IXF0 933 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 ITFG1Q8TB96 612 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 SHDQ96IW2 340 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 EIF2AK1Q9BQI3 630 aaKnown RBP8.11□□□□□ -1.11
YBX3-209ENST00000540747 TTPALQ9BTX7 342 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 APOL6Q9BWW8 343 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 TM6SF1Q9BZW5 370 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 EPC1Q9H2F5 836 aa8.11□□□□□ -1.11
YBX3-209ENST00000540747 FZD8Q9H461 694 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms